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BaseInfo

ncRNA ID	novel_gma_miR1870
Species	Glycine max
Class	miRNA
Genome position	Chr10:42975304-42975464 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451650
Length	24
Mature sequence(if miRNA)	138 - AUUAAAAUGUAAACUAUAAGAACU - 161
Stem-loop(if miRNA)	--        A              C             ---------C    AU          CU     AUAACUAAAAAAA   UUCUUAUA UUUAUAUUUUAAUU UUUUUUAGUCUCU          AAGU  UUUUUUUAGU  UUAUA             U   |||||||| |||||||||||||| |||||||||||||          ||||  ||||||||||  |||||   AAGAAUAU AAAUGUAAAAUUAA AGAAAAUCAGGGA          UUCA  AGAAAAAUCA  GAUAU             A UC        C              A             AAUUAAAACU    CC          AG     CAAAGUACUAAAA
Stem-loop sequence	UUCUUAUAAUUUAUAUUUUAAUUCUUUUUUAGUCUCUCAAGUAUUUUUUUUAGUCUUUAUAAUAACUAAAAAAAUAAAAAUCAUGAAACUAUAGGAACUAAAAAGACCACUUUCAAAAUUAAAGGGACUAAAAGAAAAUUAAAAUGUAAACUAUAAGAACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006577048.2	ncRNA:24   UCAAGAAUAUCAAAUGUAAAAUUA   1   |||*|*|||||||||||||||||| targets:1927   AGUCCCUAUAGUUUACAUUUUAAU   1950 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X1, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget
XM_014773932.1	ncRNA:24   UCAAGAAUAUCAAAUGUAAAAUUA   1   |||*|*|||||||||||||||||| targets:2037   AGUCCCUAUAGUUUACAUUUUAAU   2060 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X2, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget
XM_014773018.1	ncRNA:24   UCAAGAAUAUCAAAUGUAAAAUUA   1   |*|*|||=|=*||||||||||||| targets:569   AAUGCUUGUGUUUUACAUUUUAAU   592 Target Full Sequence	3.0	PREDICTED: Glycine max F-box/LRR-repeat protein 17-like (LOC102669631), transcript variant X2, mRNA	F-box/LRR-repeat protein 17-like(LOC102669631)	coding protein	psRNATarget
XM_006605612.2	ncRNA:24   UCAAGAAUAUCAAAUGUAAAAUUA   1   |*|*|||=|=*||||||||||||| targets:586   AAUGCUUGUGUUUUACAUUUUAAU   609 Target Full Sequence	3.0	PREDICTED: Glycine max F-box/LRR-repeat protein 17-like (LOC102669631), transcript variant X1, mRNA	F-box/LRR-repeat protein 17-like(LOC102669631)	coding protein	psRNATarget