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BaseInfo

ncRNA ID	novel_gma_miR1862
Species	Glycine max
Class	miRNA
Genome position	Chr14:5659842-5659950 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451650;SRR1451653;SRR1451655;SRR1451657;SRR1451662;SRR1451664;SRR1451670;SRR2968974;SRR1451604;SRR1451605
Length	21
Mature sequence(if miRNA)	1 - GGAGCAUCAUCAAGAUUCACA - 21
Stem-loop(if miRNA)	-- G                A  AGCU    -      --  UG      - UG  C   G AGCAUCAUCAAGAUUC CA    UCAG GGGUUU  UU  UUUGGG G  GU C   | |||||||||||||||| ||    |||| ||||||  ||  |||||| |  || C   C UCGUAGUAGUUCUAAG GU    AGUU CCCGAA  AA  AAACCC C  UA U GA G                G  --AU    U      UU  GU      U GU  U
Stem-loop sequence	GGAGCAUCAUCAAGAUUCACAAGCUUCAGGGGUUUUUUGUUUGGGGUGGUCCCUUAUUGCUCCCAAAUGAAUUAAGCCCUUUGAUAUGGGAAUCUUGAUGAUGCUGCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006578718.2	ncRNA:21   ACACUUAGAACUACUACGAGG   1   |**|||*|||||||||||||| targets:805   UAAGAAGCUUGAUGAUGCUCC   825 Target Full Sequence	2.0	PREDICTED: Glycine max probable receptor-like serine/threonine-protein kinase At5g57670 (LOC100815722), mRNA	probable receptor-like serine/threonine-protein kinase At5g57670(LOC100815722)	coding protein	psRNATarget
JA894828.1	ncRNA:21   ACACUUAGAACUACUACGAGG   1   ||*||||||||||||||||*| targets:118   UGAGAAUCUUGAUGAUGCUGC   138 Target Full Sequence	2.5	Sequence 145 from Patent WO2011067745	NA	coding protein	psRNATarget
XM_006605906.2	ncRNA:21   ACACUUAGAACUACUACGAGG   1   **||||*||||||||||=||| targets:888   CUUGAAGCUUGAUGAUGUUCC   908 Target Full Sequence	2.5	PREDICTED: Glycine max kynurenine formamidase-like (LOC100801168), transcript variant X3, mRNA	kynurenine formamidase-like(LOC100801168)	coding protein	psRNATarget
XM_003555906.3	ncRNA:21   ACACUUAGAACUACUACGAGG   1   **||||*||||||||||=||| targets:789   CUUGAAGCUUGAUGAUGUUCC   809 Target Full Sequence	2.5	PREDICTED: Glycine max kynurenine formamidase-like (LOC100801168), transcript variant X1, mRNA	kynurenine formamidase-like(LOC100801168)	coding protein	psRNATarget
XM_006605905.2	ncRNA:21   ACACUUAGAACUACUACGAGG   1   **||||*||||||||||=||| targets:790   CUUGAAGCUUGAUGAUGUUCC   810 Target Full Sequence	2.5	PREDICTED: Glycine max kynurenine formamidase-like (LOC100801168), transcript variant X2, mRNA	kynurenine formamidase-like(LOC100801168)	coding protein	psRNATarget
NM_001248444.2	ncRNA:21   ACACUUAGAACUACUACGAGG   1   ***|==||||||||||||||| targets:446   CAAGGGUCUUGAUGAUGCUCC   466 Target Full Sequence	3.0	Glycine max uncharacterized LOC100500252 (LOC100500252), mRNA	uncharacterized LOC100500252(LOC100500252)	coding protein	psRNATarget
BT091163.1	ncRNA:21   ACACUUAGAACUACUACGAGG   1   ***|==||||||||||||||| targets:447   CAAGGGUCUUGAUGAUGCUCC   467 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-7E18 unknown mRNA	NA	coding protein	psRNATarget