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BaseInfo

ncRNA ID novel_gma_miR1861
Species Glycine max
Class miRNA
Genome position Chr14:45123130-45123226 [-]
Reference genome Glycine_max_v2.0
Source SRR1294482
Length 24
Mature sequence(if miRNA) 1 - AACUUGAUCCGUAAGACUUUUAUG - 24
Stem-loop(if miRNA) --               A   U            CUU          A
  UAAAAGUCUUACGGA CAA UUGAUCCGUAAG   UUUAUGGAUC A
  ||||||||||||||| ||| ||||||||||||   |||||||||| C
  AUUUUCAGAAUGCCU GUU AACUAGGUAUUU   AAAUGUCUAG U
GU               A   C            UUC          U
Stem-loop sequence UAAAAGUCUUACGGAACAAUUUGAUCCGUAAGCUUUUUAUGGAUCAACUUGAUCUGUAAACUUUUUAUGGAUCAACUUGAUCCGUAAGACUUUUAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768353.1
ncRNA:24   GUAUUUUCAGAAUGCCUAGUUCAA   1
  |=*|||||**||||||||||||||
targets:584   CGCAAAAGAAUUACGGAUCAAGUU   607

2.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_006600975.2
ncRNA:24   GUAUUUUCAGAAUGCCUAGUUCAA   1
  |=||||||*||||||||||||*||
targets:1241   CGUAAAAGCCUUACGGAUCAACUU   1264

2.5 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget