ncRNA ID | novel_gma_miR1861 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:45123130-45123226 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294482 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACUUGAUCCGUAAGACUUUUAUG - 24 |
Stem-loop(if miRNA) |
--               A   U            CUU          A   UAAAAGUCUUACGGA CAA UUGAUCCGUAAG   UUUAUGGAUC A   ||||||||||||||| ||| ||||||||||||   |||||||||| C   AUUUUCAGAAUGCCU GUU AACUAGGUAUUU   AAAUGUCUAG U GU               A   C            UUC          U |
Stem-loop sequence | UAAAAGUCUUACGGAACAAUUUGAUCCGUAAGCUUUUUAUGGAUCAACUUGAUCUGUAAACUUUUUAUGGAUCAACUUGAUCCGUAAGACUUUUAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014768353.1 |
|
2.0 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget | |||||||||
XM_006600975.2 |
|
2.5 | PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA | basic leucine zipper 9-like(LOC100776831) | coding protein | psRNATarget |