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BaseInfo

ncRNA ID novel_gma_miR1859
Species Glycine max
Class miRNA
Genome position Chr14:23761180-23761272 [+]
Reference genome Glycine_max_v2.0
Source SRR1451650;SRR1451655;SRR1451658;SRR1451662;SRR1451606;SRR1451607;SRR1451609;SRR1451610;SRR1451611;SRR1451621
Length 24
Mature sequence(if miRNA) 1 - AUUUUGAAUUUGAAUUUUGAACCU - 24
Stem-loop(if miRNA) --A                UG ACCU UAAUCGAUUACCAGAUGUUU
   UUUUGAAUUUGAAUUU  A    G                    G
   ||||||||||||||||  |    |                    U
   AAAACUUAAACUUAAA  U    C                    A
CUG                GU --CA AAAGCAACGACCAUUAGCUA
Stem-loop sequence AUUUUGAAUUUGAAUUUUGAACCUGUAAUCGAUUACCAGAUGUUUGUAAUCGAUUACCAGCAACGAAACACUUGAAAUUCAAAUUCAAAAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003516345.3
ncRNA:24   UCCA---AGUUUUAAGUUUAAGUUUUA   1
  |||*---||||||||||||*|||||||
targets:189   AGGAAAAUCAAAAUUCAAAAUCAAAAU   215

1.5 PREDICTED: Glycine max protein trichome birefringence-like 35 (LOC100789791), mRNA protein trichome birefringence-like 35(LOC100789791) coding protein psRNATarget
XM_003518412.3
ncRNA:24   UCCAAGUUUUAAGUUUAAGUUUUA   1
  ****|||||||||||||||*||||
targets:134   UAAAUCAAAAUUCAAAUUCCAAAU   157

1.5 PREDICTED: Glycine max BTB/POZ and MATH domain-containing protein 4 (LOC100806769), mRNA BTB/POZ and MATH domain-containing protein 4(LOC100806769) coding protein psRNATarget