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BaseInfo

ncRNA ID	novel_gma_miR1858
Species	Glycine max
Class	miRNA
Genome position	Chr14:20394613-20394707 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451650
Length	24
Mature sequence(if miRNA)	1 - UUAGGACAACCGAUGUAGAAAUCU - 24
Stem-loop(if miRNA)	--         C          A   -GA       A        U     UUAGGACAA CGAUGUAGAA UCU   UAUUUUA GACGGGUU GGA   ||||||||| |||||||||| |||   ||||||| |||||||| ||G   AAUCCUGUU GCUACAUCUU AGA   GUAAAAU CUGCCCAA CCG AU         A          A   AGG       A        -
Stem-loop sequence	UUAGGACAACCGAUGUAGAAAUCUGAUAUUUUAAGACGGGUUUGGAGGCCAACCCGUCAUAAAAUGGGAAGAAUUCUACAUCGAUUGUCCUAAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014767461.1	ncRNA:24   UCUAAAGAUGUAGCCAACAGGAUU   1   **||||||||||=||||||||||| targets:2107   UUAUUUCUACAUUGGUUGUCCUAA   2130 Target Full Sequence	1.5	PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA	putative dual specificity protein phosphatase DSP8(LOC100787468)	coding protein	psRNATarget
XM_014767461.1	ncRNA:24   UCUA-----AAGAUGUAGCCAACAGGAUU   1   *|||-----||=|||||||||||||||=| targets:544   UGAUGACCAUUUUACAUCGGUUGUCCUGA   572 Target Full Sequence	2.5	PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA	putative dual specificity protein phosphatase DSP8(LOC100787468)	coding protein	psRNATarget
XM_014767461.1	ncRNA:24   UCUAAAGAUGUAGCCAACAGGAUU   1   **|*|*|||||||||||*|||||| targets:2249   CCAAUCCUACAUCGGUUAUCCUAA   2272 Target Full Sequence	2.5	PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA	putative dual specificity protein phosphatase DSP8(LOC100787468)	coding protein	psRNATarget
XM_014771283.1	ncRNA:24   UCUA--------AAGAUGUAGCCAACAGGAUU   1   =|||--------|||*||||||||||||*||| targets:1860   GGAUAUUCAUAAUUCAACAUCGGUUGUCAUAA   1891 Target Full Sequence	2.5	PREDICTED: Glycine max protein NRT1/ PTR FAMILY 7.3-like (LOC100803433), transcript variant X1, mRNA	protein NRT1/ PTR FAMILY 7.3-like(LOC100803433)	coding protein	psRNATarget
XM_014771284.1	ncRNA:24   UCUA--------AAGAUGUAGCCAACAGGAUU   1   =|||--------|||*||||||||||||*||| targets:1924   GGAUAUUCAUAAUUCAACAUCGGUUGUCAUAA   1955 Target Full Sequence	2.5	PREDICTED: Glycine max protein NRT1/ PTR FAMILY 7.3-like (LOC100803433), transcript variant X2, mRNA	protein NRT1/ PTR FAMILY 7.3-like(LOC100803433)	coding protein	psRNATarget