ncRNA ID | novel_gma_miR1850 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:40059634-40059698 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451650 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CUUACGAAUCAACUUGAUCUGU - 22 |
Stem-loop(if miRNA) |
--C           C              GAU    UUACGAAUCAA UUGAUCUGUAUGUU   A    ||||||||||| ||||||||||||||   U    AAUGCUUAGUU AAUUAGGCAUACAA   U GAA           U              AUU |
Stem-loop sequence | CUUACGAAUCAACUUGAUCUGUAUGUUGAUAUUUUAAACAUACGGAUUAAUUUGAUUCGUAAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006593444.2 |
|
1.5 | PREDICTED: Glycine max calcium-transporting ATPase 8, plasma membrane-type-like (LOC100813841), transcript variant X11, mRNA | calcium-transporting ATPase 8, plasma membrane-type-like(LOC100813841) | coding protein | psRNATarget | |||||||||
XM_003524153.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100805437 (LOC100805437), mRNA | uncharacterized LOC100805437(LOC100805437) | coding protein | psRNATarget |