ncRNA ID | novel_gma_miR1848 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:1197406-1197515 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451650 |
Length | 24 |
Mature sequence(if miRNA) | 87 - CCUUCUCGCGGAAGAUGGUUCUUC - 110 |
Stem-loop(if miRNA) |
--               A           GA  - U  UU  C  A G       A   AGAACCAUCUUCCGC AGAAGGAAAUG  AC G CU  GA AC C CGGAAGA G   ||||||||||||||| |||||||||||  || | ||  || || | |||||||   UCUUGGUAGAAGGCG UCUUCCUUUAC  UG C GA  CU UG G GCCUUCU C CU               C           AC  U U  -U  A  G G       U |
Stem-loop sequence | AGAACCAUCUUCCGCAAGAAGGAAAUGGAACGUCUUUGACACACGCGGAAGAAGCUUCUUCCGGGGGUAUCUAGUCUGUCACAUUUCCUUCUCGCGGAAGAUGGUUCUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003534684.3 |
|
2.0 | PREDICTED: Glycine max F-box protein CPR30-like (LOC100812846), transcript variant X2, mRNA | F-box protein CPR30-like(LOC100812846) | coding protein | psRNATarget |