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BaseInfo

ncRNA ID novel_gma_miR1847
Species Glycine max
Class miRNA
Genome position Chr1:18074748-18074802 [+]
Reference genome Glycine_max_v2.0
Source SRR1451650;SRR1451660;SRR1451626
Length 22
Mature sequence(if miRNA) 34 - CUUCUUGGUUAUUGGCUCUGGU - 55
Stem-loop(if miRNA) --CU    AG      C     AU   
    GAGU  GUGACC AGAAG  GAUG
    ||||  |||||| |||||  |||U
    CUCG  UAUUGG UCUUC  UUGA
UGGU    GU      U     CG   
Stem-loop sequence CUGAGUAGGUGACCCAGAAGAUGAUGUAGUUGCCUUCUUGGUUAUUGGCUCUGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006600526.2
ncRNA:22   UGGUCUCGGUUAUUGGUUCUUC   1
  **==||||||||||||||*|||
targets:466   CAUGGAGCCAAUAACCAACAAG   487

2.5 PREDICTED: Glycine max transcription factor TCP17 (LOC102670246), transcript variant X2, mRNA transcription factor TCP17(LOC102670246) coding protein psRNATarget
XM_006600528.2
ncRNA:22   UGGUCUCGGUUAUUGGUUCUUC   1
  **==||||||||||||||*|||
targets:444   CAUGGAGCCAAUAACCAACAAG   465

2.5 PREDICTED: Glycine max transcription factor TCP17 (LOC102670246), transcript variant X3, mRNA transcription factor TCP17(LOC102670246) coding protein psRNATarget
XM_006600527.2
ncRNA:22   UGGUCUCGGUUAUUGGUUCUUC   1
  **==||||||||||||||*|||
targets:330   CAUGGAGCCAAUAACCAACAAG   351

2.5 PREDICTED: Glycine max transcription factor TCP17 (LOC102670246), transcript variant X1, mRNA transcription factor TCP17(LOC102670246) coding protein psRNATarget