ncRNA ID | novel_gma_miR1842 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:3882671-3882796 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294482;SRR1294484 |
Length | 21 |
Mature sequence(if miRNA) | 106 - UUUUAAAAGUCUGGCCUGGCC - 126 |
Stem-loop(if miRNA) |
--              --        U A   U    UAC      --       --   CUGAGCC   CCAGGUCAGGCUUU  GAAAGGCC G GCC AGCC   GAUGAA  UCUUUGA  GGC       U   ||||||||||||||  |||||||| | ||| ||||   ||||||  |||||||  |||   GGUCCGGUCUGAAA  UUUUCUGG C CGG UCGG   UUAUUU  AGAAACU  CCG       G CC              AU        U -   C    -UU      UC       AU   AUAUCCG |
Stem-loop sequence | CCAGGUCAGGCUUUGAAAGGCCUGAGCCUAGCCUACGAUGAAUCUUUGAGGCCUGAGCCUGGCCUAUAGCCUAUCAAAGACUUUUAUUUUGGCUCGGCCUGGUCUUUUUAAAAGUCUGGCCUGGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003550759.3 |
|
3.0 | PREDICTED: Glycine max NEDD8 ultimate buster 1-like (LOC100778435), mRNA | NEDD8 ultimate buster 1-like(LOC100778435) | coding protein | psRNATarget |