Search result

BaseInfo

ncRNA ID novel_gma_miR1840
Species Glycine max
Class miRNA
Genome position Chr12:23153874-23153948 [+]
Reference genome Glycine_max_v2.0
Source SRR1451650;SRR1451653;SRR1451660;SRR1753104;SRR1753105
Length 21
Mature sequence(if miRNA) 55 - UAGUGAAGCGUUGAAGGGACC - 75
Stem-loop(if miRNA) --   U     C - GA     UCACUA     - -  C
  UCC CUUCA C C  CACUA      AAAGU C CA C
  ||| ||||| | |  |||||      ||||| | || C
  AGG GAAGU G G  GUGAU      UUUCA G GU A
CC   -     U C AA     CUUUAA     A C  C
Stem-loop sequence UCCUCUUCACCCGACACUAUCACUAAAAGUCCACCCACUGCGAACUUUAAUUUCUAGUGAAGCGUUGAAGGGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001253051.1
ncRNA:21   CCAGGGAAGUUGCGAAGUGAU   1
  |*|||||||||=||||||||=
targets:311   GUUCCCUUCAAUGCUUCACUG   331

2.5 Glycine max basic 7S globulin-like (LOC100806719), mRNA basic 7S globulin-like(LOC100806719) coding protein psRNATarget