ncRNA ID | novel_gma_miR1840 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr12:23153874-23153948 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451650;SRR1451653;SRR1451660;SRR1753104;SRR1753105 |
Length | 21 |
Mature sequence(if miRNA) | 55 - UAGUGAAGCGUUGAAGGGACC - 75 |
Stem-loop(if miRNA) |
--   U     C - GA     UCACUA     - -  C   UCC CUUCA C C  CACUA      AAAGU C CA C   ||| ||||| | |  |||||      ||||| | || C   AGG GAAGU G G  GUGAU      UUUCA G GU A CC   -     U C AA     CUUUAA     A C  C |
Stem-loop sequence | UCCUCUUCACCCGACACUAUCACUAAAAGUCCACCCACUGCGAACUUUAAUUUCUAGUGAAGCGUUGAAGGGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001253051.1 |
|
2.5 | Glycine max basic 7S globulin-like (LOC100806719), mRNA | basic 7S globulin-like(LOC100806719) | coding protein | psRNATarget |