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BaseInfo

ncRNA ID	novel_gma_miR1827
Species	Glycine max
Class	miRNA
Genome position	Chr11:31212575-31212727 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451650;SRR1451652;SRR1451653;SRR1451660;SRR1451662;SRR1451664;SRR1451626
Length	23
Mature sequence(if miRNA)	1 - AUUUUACAAGGAUUUAUAAAACU - 23
Stem-loop(if miRNA)	--UC          C  C                A  UG           U  -AGG    AC      A    CACG     UUAUAAAUCC UG AAAAUUGGUUUUGGAA UC  AUUUGGACGUU AC    AACC  UCAGAC UUGA    U     |||||||||| || |||||||||||||||| ||  ||||||||||| ||    ||||  |||||| ||||     AAUAUUUAGG AC UUUUAACCAGAGCCUU AG  UAAACCUGCAA UG    UUGG  AGUCUG AACU    G UCAA          A  A                C  GU           C  GCAA    --      C    AACA
Stem-loop sequence	UCUUAUAAAUCCCUGCAAAAUUGGUUUUGGAAAUCUGAUUUGGACGUUUACAGGAACCACUCAGACAUUGACACGUGACAAUCAACGUCUGAGGUUAACGGUCAACGUCCAAAUUGGACUUCCGAGACCAAUUUUACAAGGAUUUAUAAAACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014772068.1	ncRNA:23   UCAAAAUAUUUAGGAACAUUUUA   1   ||||||||||||||*|||||||| targets:835   AGUUUUAUAAAUCCCUGUAAAAU   857 Target Full Sequence	1.5	PREDICTED: Glycine max ribulose-phosphate 3-epimerase, cytoplasmic isoform (LOC100500085), transcript variant X2, mRNA	ribulose-phosphate 3-epimerase, cytoplasmic isoform(LOC100500085)	coding protein	psRNATarget
XM_014761878.1	ncRNA:23   UCAAAAUAUUUAGGAACAUUUUA   1   |***|||||||||||||||||=| targets:180   AAAAUUAUAAAUCCUUGUAAAGU   202 Target Full Sequence	1.5	PREDICTED: Glycine max probable boron transporter 2 (LOC100795777), transcript variant X2, mRNA	probable boron transporter 2(LOC100795777)	coding protein	psRNATarget
XM_014761877.1	ncRNA:23   UCAAAAUAUUUAGGAACAUUUUA   1   |***|||||||||||||||||=| targets:421   AAAAUUAUAAAUCCUUGUAAAGU   443 Target Full Sequence	1.5	PREDICTED: Glycine max probable boron transporter 2 (LOC100795777), transcript variant X1, mRNA	probable boron transporter 2(LOC100795777)	coding protein	psRNATarget
XM_014761879.1	ncRNA:23   UCAAAAUAUUUAGGAACAUUUUA   1   |***|||||||||||||||||=| targets:626   AAAAUUAUAAAUCCUUGUAAAGU   648 Target Full Sequence	1.5	PREDICTED: Glycine max probable boron transporter 2 (LOC100795777), transcript variant X3, mRNA	probable boron transporter 2(LOC100795777)	coding protein	psRNATarget