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BaseInfo

ncRNA ID novel_gma_miR1822
Species Glycine max
Class miRNA
Genome position Chr11:25614855-25614988 [+]
Reference genome Glycine_max_v2.0
Source SRR1451650;SRR1451607;SRR1451609;SRR1451611
Length 22
Mature sequence(if miRNA) 113 - UCAAAAAACCGAUGUUAACUGU - 134
Stem-loop(if miRNA) --  A        A                        -  GUC    GUAACAUAUUCGUUAACAUCG
  GG UUAACAUC GUUUUUUGAAAAAACCGAUGUUAA CU   AAUA                     G
  || |||||||| |||||||||||||||||||||||| ||   ||||
  UC AAUUGUAG CAAAAAACUUUUUUGGCUACAAUU GG   GCAA                     U
UG  -        C                        U  --U    UUGUAGCCAAAAAUAUUUUUU
Stem-loop sequence GGAUUAACAUCAGUUUUUUGAAAAAACCGAUGUUAACUGUCAAUAGUAACAUAUUCGUUAACAUCGGUUUUUUUAUAAAAACCGAUGUUAACGUGGUUUAACAUCGGUUUUUUCAAAAAACCGAUGUUAACUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI410543.1
ncRNA:22   UGUCAAUUGUAGCCAAAAAACU   1
  |||*||||||||||||||||*|
targets:16   ACAUUUAACAUCGGUUUUUUAA   37

2.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
HI410543.1
ncRNA:22   UGUCAAUUGUAGCCAAAAAACU   1
  |||*||||||||||||||||*|
targets:57   ACAUUUAACAUCGGUUUUUUAA   78

2.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
HI410543.1
ncRNA:22   UGUCAAUUGUAGCCAAAAAACU   1
  |||*||||||||||||||||*|
targets:117   ACAUUUAACAUCGGUUUUUUAA   138

2.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
HI410543.1
ncRNA:22   UGUCAAUUGUAGCCAAAAAACU   1
  |||*||||||||||||||||*|
targets:158   ACAUUUAACAUCGGUUUUUUAA   179

2.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
LQ242673.1
ncRNA:22   UGUCAAUUGUAGCCAAAAAACU   1
  |||*||||||||||||||||*|
targets:16   ACAUUUAACAUCGGUUUUUUAA   37

2.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
LQ242673.1
ncRNA:22   UGUCAAUUGUAGCCAAAAAACU   1
  |||*||||||||||||||||*|
targets:57   ACAUUUAACAUCGGUUUUUUAA   78

2.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
LQ242673.1
ncRNA:22   UGUCAAUUGUAGCCAAAAAACU   1
  |||*||||||||||||||||*|
targets:117   ACAUUUAACAUCGGUUUUUUAA   138

2.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
LQ242673.1
ncRNA:22   UGUCAAUUGUAGCCAAAAAACU   1
  |||*||||||||||||||||*|
targets:158   ACAUUUAACAUCGGUUUUUUAA   179

2.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
JB171004.1
ncRNA:22   UGUCAAUUGUAGCCAAAAAACU   1
  |||*||||||||||||||||*|
targets:16   ACAUUUAACAUCGGUUUUUUAA   37

2.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
JB171004.1
ncRNA:22   UGUCAAUUGUAGCCAAAAAACU   1
  |||*||||||||||||||||*|
targets:57   ACAUUUAACAUCGGUUUUUUAA   78

2.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
JB171004.1
ncRNA:22   UGUCAAUUGUAGCCAAAAAACU   1
  |||*||||||||||||||||*|
targets:117   ACAUUUAACAUCGGUUUUUUAA   138

2.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
JB171004.1
ncRNA:22   UGUCAAUUGUAGCCAAAAAACU   1
  |||*||||||||||||||||*|
targets:158   ACAUUUAACAUCGGUUUUUUAA   179

2.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget