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BaseInfo

ncRNA ID novel_gma_miR1817
Species Glycine max
Class miRNA
Genome position Chr17:36423244-36423316 [-]
Reference genome Glycine_max_v2.0
Source SRR1294481;SRR2045374;SRR2045375;SRR3067738;SRR835758;SRR835761;SRR835763;SRR835773
Length 22
Mature sequence(if miRNA) 52 - CAGGUAGAGAGUUUGAGGUGCC - 73
Stem-loop(if miRNA) --CA      G     G     CCC    ----     
    GGUAGA AGUUU AGGUG   UUGA    GAUAUU
    |||||| ||||| |||||   ||||    |||||C
    CCGUUU UUAAA UUCAC   AACU    CUAUAU
UCUA      G     A     AAA    AAAC     
Stem-loop sequence CAGGUAGAGAGUUUGAGGUGCCCUUGAGAUAUUCUAUAUCCAAAUCAAAAACACUUAAAAUUGUUUGCCAUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT097802.1
ncRNA:22   CCGUGGAGUUUGAGAGAUGGAC   1
  |**|||||||||||||*||||*
targets:491   GUGACCUCAAACUCUCCACCUU   512

2.5 Soybean clone JCVI-FLGm-26K22 unknown mRNA NA coding protein psRNATarget