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BaseInfo

ncRNA ID novel_gma_miR1813
Species Glycine max
Class miRNA
Genome position Chr11:22345922-22346013 [+]
Reference genome Glycine_max_v2.0
Source SRR1451650
Length 24
Mature sequence(if miRNA) 1 - ACCGUCUUUGAAUGUAAAUGCUGA - 24
Stem-loop(if miRNA) --                AAU   GACACAACAUA       A      A
  ACCGUCUUUGAAUGUA   GCU           CAAAGAC AUUAUU G
  ||||||||||||||||   |||           ||||||| ||||||
  UGGCAGAAACUUACAU   UGG           GUUUCUG UAAUAA C
AU                ACU   --------AAA       C      U
Stem-loop sequence ACCGUCUUUGAAUGUAAAUGCUGACACAACAUACAAAGACAAUUAUUAGCUAAUAAUCGUCUUUGAAAGGUUCAUACAUUCAAAGACGGUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003534217.3
ncRNA:24   AGUCGUAAAUGUAAGUUUCUGCCA   1
  *||--||||||||||||*||||||
targets:1422   CCA--AUUUACAUUCAACGACGGU   1443

1.5 PREDICTED: Glycine max uncharacterized LOC100785742 (LOC100785742), mRNA uncharacterized LOC100785742(LOC100785742) coding protein psRNATarget