ncRNA ID | gar-miR2947 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | NA - UAUACCGUGCCCAUGACUGUAG - NA |
Stem-loop(if miRNA) |
    U  UA  C  A     -                  A        UU   UGAUU AGCU GU  AG GA GUUAC GUUAUGGGCAUGGUAUGG UUGCUGUU  UGA     U |||| ||  || || ||||| |||||||||||||||||| ||||||||  |||     G UCGA CG  UC CU CGAUG CAGUACCCGUGCCAUAUU AACGACAA  ACU     U     -  GC  A  A     U                  A        UU   UUCGU |
Stem-loop sequence | AGCUUGUUAAGCGAAGUUACGUUAUGGGCAUGGUAUGGAUUGCUGUUUUUGAUGAUUUGUUGCUUUCAUUAACAGCAAAUUAUACCGUGCCCAUGACUGUAGCAUCACUCGGCAGCU |
1 | PMID:19889219
"Genome-wide analysis reveals rapid and dynamic changes in miRNA and siRNA sequence and expression during ovule and fiber development in allotetraploid cotton (Gossypium hirsutum L.)"; Pang M, Woodward AW, Agarwal V, Guan X, Ha M, Ramachandran V, Chen X, Triplett BA, Stelly DM, Chen ZJ; Genome Biol. 10:R122(2009). |