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BaseInfo

ncRNA ID	novel_gma_miR1802
Species	Glycine max
Class	miRNA
Genome position	Chr8:2221386-2221459 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451650;SRR1451652;SRR1451653;SRR1451654;SRR1451655;SRR1451658;SRR1451660;SRR1451661;SRR1451662;SRR1451663;SRR1451664;SRR1451621
Length	21
Mature sequence(if miRNA)	54 - AUUAGCUAAUUUGUAGAAGUU - 74
Stem-loop(if miRNA)	--                 A          AAAACUU   AUUAGCUAAUUUGUAGA GUUCUCUUAU       U   ||||||||||||||||| ||||||||||   UAAUCGAUUAAACAUCU CAAGAGAAUA       U GG                 A          AAAAAUC
Stem-loop sequence	AUUAGCUAAUUUGUAGAAGUUCUCUUAUAAAACUUUUCUAAAAAAUAAGAGAACAUCUACAAAUUAGCUAAUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014763080.1	ncRNA:21   UUGAAGAUGUUUAAUCGAUUA   1   |=||||||||||||||||||| targets:3632   AGCUUCUACAAAUUAGCUAAU   3652 Target Full Sequence	0.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X6, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763076.1	ncRNA:21   UUGAAGAUGUUUAAUCGAUUA   1   |=||||||||||||||||||| targets:3737   AGCUUCUACAAAUUAGCUAAU   3757 Target Full Sequence	0.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X2, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763077.1	ncRNA:21   UUGAAGAUGUUUAAUCGAUUA   1   |=||||||||||||||||||| targets:3868   AGCUUCUACAAAUUAGCUAAU   3888 Target Full Sequence	0.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X3, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763079.1	ncRNA:21   UUGAAGAUGUUUAAUCGAUUA   1   |=||||||||||||||||||| targets:3880   AGCUUCUACAAAUUAGCUAAU   3900 Target Full Sequence	0.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X5, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763075.1	ncRNA:21   UUGAAGAUGUUUAAUCGAUUA   1   |=||||||||||||||||||| targets:3969   AGCUUCUACAAAUUAGCUAAU   3989 Target Full Sequence	0.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_006603606.2	ncRNA:21   UUGAAGAUGUUUAAUCGAUUA   1   |==|||||||||||||||||| targets:1529   AGUUUCUACAAAUUAGCUAAU   1549 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X1, mRNA	uncharacterized LOC100500460(LOC100500460)	coding protein	psRNATarget
XM_006603608.2	ncRNA:21   UUGAAGAUGUUUAAUCGAUUA   1   |==|||||||||||||||||| targets:1539   AGUUUCUACAAAUUAGCUAAU   1559 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X3, mRNA	uncharacterized LOC100500460(LOC100500460)	coding protein	psRNATarget
XM_003525187.3	ncRNA:21   UUGAAGAUGUUUAAUCGAUUA   1   =||*||||||||||||||||| targets:1908   GACAUCUACAAAUUAGCUAAU   1928 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100801179 (LOC100801179), mRNA	uncharacterized LOC100801179(LOC100801179)	coding protein	psRNATarget