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BaseInfo

ncRNA ID	novel_gma_miR1792
Species	Glycine max
Class	miRNA
Genome position	Chr11:17245460-17245596 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451650;SRR2045231;SRR1295531;SRR1451620;SRR1451625
Length	21
Mature sequence(if miRNA)	117 - UUUGAGGACCAAAUUGAACCU - 137
Stem-loop(if miRNA)	--   G     A                    A             CC      A   UA   ----  UA   GUU AAUUU GUCUUUAAGUUUUUAAAAAU AAUCAAUUUGGUU  CAAAUU UUU  AAU    GG  C   ||| ||||| |||||||||||||||||||| |||||||||||||  |||||| |||  |||    ||   CAA UUAAA CAGGAGUUUAAGAAUUUUUA UUAGUUAAAUUAG  GUUUAA AAA  UUG    CC  A UC   G     C                    C             -U      A   UC   AACU  UA
Stem-loop sequence	GUUGAAUUUAGUCUUUAAGUUUUUAAAAAUAAAUCAAUUUGGUUCCCAAAUUAUUUUAAAUGGUACAAUCCUCAAGUUCUAAAAAAUUUGUGAUUAAAUUGAUUCAUUUUUAAGAAUUUGAGGACCAAAUUGAACCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003547028.3	ncRNA:21   UCCAAGUUAAACCAGGAGUUU   1   =||*||||||||||||||||* targets:2620   GGGAUCAAUUUGGUCCUCAAC   2640 Target Full Sequence	2.0	PREDICTED: Glycine max probable protein phosphatase 2C 62 (LOC100815469), transcript variant X2, mRNA	probable protein phosphatase 2C 62(LOC100815469)	coding protein	psRNATarget
XM_014768080.1	ncRNA:21   UCCAAGUUAAACCAGGAGUUU   1   =||*||||||||||||||||* targets:2632   GGGAUCAAUUUGGUCCUCAAC   2652 Target Full Sequence	2.0	PREDICTED: Glycine max probable protein phosphatase 2C 62 (LOC100815469), transcript variant X1, mRNA	probable protein phosphatase 2C 62(LOC100815469)	coding protein	psRNATarget
XM_014773918.1	ncRNA:21   UCCAAGUUAAACCAGGAGUUU   1   **|||||*||||||||||||= targets:377   UUGUUCAUUUUGGUCCUCAAG   397 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100802202 (LOC100802202), transcript variant X2, mRNA	uncharacterized LOC100802202(LOC100802202)	coding protein	psRNATarget
XM_014773919.1	ncRNA:21   UCCAAGUUAAACCAGGAGUUU   1   **|||||*||||||||||||= targets:1332   UUGUUCAUUUUGGUCCUCAAG   1352 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100802202 (LOC100802202), transcript variant X3, mRNA	uncharacterized LOC100802202(LOC100802202)	coding protein	psRNATarget
XM_014773920.1	ncRNA:21   UCCAAGUUAAACCAGGAGUUU   1   **|||||*||||||||||||= targets:1332   UUGUUCAUUUUGGUCCUCAAG   1352 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100802202 (LOC100802202), transcript variant X4, mRNA	uncharacterized LOC100802202(LOC100802202)	coding protein	psRNATarget
XM_014773917.1	ncRNA:21   UCCAAGUUAAACCAGGAGUUU   1   **|||||*||||||||||||= targets:1332   UUGUUCAUUUUGGUCCUCAAG   1352 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100802202 (LOC100802202), transcript variant X1, mRNA	uncharacterized LOC100802202(LOC100802202)	coding protein	psRNATarget
XM_003524120.3	ncRNA:21   UCCAAGUUAAACCAGGAGUUU   1   |*|||*||||||||*|||||| targets:1707   AUGUUAAAUUUGGUACUCAAA   1727 Target Full Sequence	2.5	PREDICTED: Glycine max cytochrome P450 78A5-like (LOC100784757), mRNA	cytochrome P450 78A5-like(LOC100784757)	coding protein	psRNATarget