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BaseInfo

ncRNA ID novel_gma_miR1791
Species Glycine max
Class miRNA
Genome position Chr5:38544098-38544248 [+]
Reference genome Glycine_max_v2.0
Source SRR1451650;SRR1451652;SRR1451654;SRR1451660;SRR1451661;SRR1451662;SRR1451663;SRR1451664;SRR1451610
Length 21
Mature sequence(if miRNA) 131 - UGCAUGCCUCUUGUCUUACUU - 151
Stem-loop(if miRNA) --   -        U     CU       A    U  A      UAACUAUU   UU UAC   A      UUAAUUAA
  GUA GACAAGAG CAUGU  GGUAGCC AGGA GG CUUGCC        CCA  C   GGG CUUUAU        U
  ||| |||||||| |||||  ||||||| |||| || ||||||        |||  |   ||| ||||||
  CAU CUGUUCUC GUACG  UUAUCGG UCCU UC GAACGG        GGU  G   CCC GAAGUA        U
UU   U        C     -U       C    -  -      --UUAAAU   UU -UU   A      UACUCUGU
Stem-loop sequence GUAGACAAGAGUCAUGUCUGGUAGCCAAGGAUGGACUUGCCUAACUAUUCCAUUCUACGGGACUUUAUUUAAUUAAUUUGUCUCAUAUGAAGACCCUUGUUUGGUAAAUUGGCAAGCUUCCUCGGCUAUUUGCAUGCCUCUUGUCUUACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771603.1
ncRNA:21   UUCAUUCUGUUCUCCGUACGU   1
  ||||*|*||||||||||||||
targets:991   AAGUUAAACAAGAGGCAUGCA   1011

2.0 PREDICTED: Glycine max uncharacterized LOC106797327 (LOC106797327), partial mRNA uncharacterized LOC106797327(LOC106797327) coding protein psRNATarget
XM_014775137.1
ncRNA:21   UUCAUUCUGUUCUCCGUACGU   1
  ||||*|*||||||||||||||
targets:1258   AAGUUAAACAAGAGGCAUGCA   1278

2.0 PREDICTED: Glycine max uncharacterized LOC106798537 (LOC106798537), partial mRNA uncharacterized LOC106798537(LOC106798537) coding protein psRNATarget