ncRNA ID | novel_gma_miR1791 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:38544098-38544248 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451650;SRR1451652;SRR1451654;SRR1451660;SRR1451661;SRR1451662;SRR1451663;SRR1451664;SRR1451610 |
Length | 21 |
Mature sequence(if miRNA) | 131 - UGCAUGCCUCUUGUCUUACUU - 151 |
Stem-loop(if miRNA) |
--   -        U     CU       A    U  A      UAACUAUU   UU UAC   A      UUAAUUAA   GUA GACAAGAG CAUGU  GGUAGCC AGGA GG CUUGCC        CCA  C   GGG CUUUAU        U   ||| |||||||| |||||  ||||||| |||| || ||||||        |||  |   ||| ||||||   CAU CUGUUCUC GUACG  UUAUCGG UCCU UC GAACGG        GGU  G   CCC GAAGUA        U UU   U        C     -U       C    -  -      --UUAAAU   UU -UU   A      UACUCUGU |
Stem-loop sequence | GUAGACAAGAGUCAUGUCUGGUAGCCAAGGAUGGACUUGCCUAACUAUUCCAUUCUACGGGACUUUAUUUAAUUAAUUUGUCUCAUAUGAAGACCCUUGUUUGGUAAAUUGGCAAGCUUCCUCGGCUAUUUGCAUGCCUCUUGUCUUACUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014771603.1 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC106797327 (LOC106797327), partial mRNA | uncharacterized LOC106797327(LOC106797327) | coding protein | psRNATarget | |||||||||
XM_014775137.1 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC106798537 (LOC106798537), partial mRNA | uncharacterized LOC106798537(LOC106798537) | coding protein | psRNATarget |