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BaseInfo

ncRNA ID	novel_gma_miR1789
Species	Glycine max
Class	miRNA
Genome position	Chr9:32721460-32721665 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451649;SRR1451657;SRR1451662;SRR1451663;SRR1294484;SRR3160568
Length	24
Mature sequence(if miRNA)	183 - AUUGGUCAGGACUAUUUUUUAGCC - 206
Stem-loop(if miRNA)	--    GU             U  C    U   -A           -----------     C AUCUUGACCAAUGAUGUUUUUCAGCCGACAUUGGGUAGGUUCUAUU   AUUG  CAGGACUAUUUUU AG CAAC UCG  CUAGGGAUUUU           UCGGC A                                              G   ||||  ||||||||||||| || |||| |||  |||||||||||           ||||| |   UAAC  GUUCUGAUAAAAA UC GUUG AGC  GAUUUUUAAGG           CUGUU U                                              G UG    UG             -  A    C   CG           AUCAUUCACAA     - UUUUUAGAUAGGUUAUAGCCGAUUUUUUAUCGAACCAGCUACAGCU
Stem-loop sequence	AUUGGUCAGGACUAUUUUUUAGCCAACUUCGACUAGGGAUUUUUCGGCCAAUCUUGACCAAUGAUGUUUUUCAGCCGACAUUGGGUAGGUUCUAUUGGUCGACAUCGACCAAGCUAUUUUUUAGCCGAUAUUGGAUAGAUUUUUUUUGUCAACACUUACUAGGAAUUUUUAGGCCGACGUUGACUAAAAAUAGUCUUGGUCAAUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014765741.1	ncRNA:24   CCGAUUUUUUAUCAGGACUGGUUA   1   *****|||||||||=||||||||| targets:1093   AAAAUAAAAAUAGUUCUGACCAAU   1116 Target Full Sequence	1.5	PREDICTED: Glycine max FIP1[III]-like protein (LOC106795505), mRNA	FIP1[III]-like protein(LOC106795505)	coding protein	psRNATarget
XM_006597640.2	ncRNA:24   CCGAUUUUUUAUCAGGACUGGUUA   1   *****=||||||||=||||||||| targets:3248   AAAAUGAAAAUAGUUCUGACCAAU   3271 Target Full Sequence	2.5	PREDICTED: Glycine max FIP1[III]-like protein (LOC100816009), transcript variant X3, mRNA	FIP1[III]-like protein(LOC100816009)	coding protein	psRNATarget
XM_006597641.2	ncRNA:24   CCGAUUUUUUAUCAGGACUGGUUA   1   *****=||||||||=||||||||| targets:3248   AAAAUGAAAAUAGUUCUGACCAAU   3271 Target Full Sequence	2.5	PREDICTED: Glycine max FIP1[III]-like protein (LOC100816009), transcript variant X4, mRNA	FIP1[III]-like protein(LOC100816009)	coding protein	psRNATarget
XM_014768179.1	ncRNA:24   CCGAUUUUUUAUCAGGACUGGUUA   1   *****=||||||||=||||||||| targets:3252   AAAAUGAAAAUAGUUCUGACCAAU   3275 Target Full Sequence	2.5	PREDICTED: Glycine max FIP1[III]-like protein (LOC100816009), transcript variant X2, mRNA	FIP1[III]-like protein(LOC100816009)	coding protein	psRNATarget
XM_006597639.2	ncRNA:24   CCGAUUUUUUAUCAGGACUGGUUA   1   *****=||||||||=||||||||| targets:3257   AAAAUGAAAAUAGUUCUGACCAAU   3280 Target Full Sequence	2.5	PREDICTED: Glycine max FIP1[III]-like protein (LOC100816009), transcript variant X1, mRNA	FIP1[III]-like protein(LOC100816009)	coding protein	psRNATarget