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BaseInfo

ncRNA ID novel_gma_miR1788
Species Glycine max
Class miRNA
Genome position Chr9:33446795-33446837 [+]
Reference genome Glycine_max_v2.0
Source SRR1451649
Length 21
Mature sequence(if miRNA) 1 - UCUUGAAAGACUUGAACUUUC - 21
Stem-loop(if miRNA) U   GA      -   -   U
 CUU  AAGACU UGA ACU U
 |||  |||||| ||| ||| C
 GAG  UUCUGA ACU UGA A
C   AG      C   G   U
Stem-loop sequence UCUUGAAAGACUUGAACUUUCAUAGUGUCACAGUCUUGAGAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK246033.1
ncRNA:21   CUUUCAAGUUCAGAAAGUUCU   1
  *|||||**|||||||||||||
targets:999   CAAAGUCGAAGUCUUUCAAGA   1019

2.0 Glycine max cDNA, clone: GMFL01-49-E16 NA coding protein psRNATarget
XM_014766234.1
ncRNA:21   CUUUCAAGUUCAGAAAGUUCU   1
  *|||||**|||||||||||||
targets:2119   CAAAGUCGAAGUCUUUCAAGA   2139

2.0 PREDICTED: Glycine max uncharacterized LOC100808998 (LOC100808998), mRNA uncharacterized LOC100808998(LOC100808998) coding protein psRNATarget
BT094523.1
ncRNA:21   CUUUCAAGUUCAGAAAGUUCU   1
  |||||||||||||||||*||*
targets:205   GAAAGUUCAAGUCUUUCCAGC   225

2.5 Soybean clone JCVI-FLGm-18D12 unknown mRNA NA coding protein psRNATarget