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BaseInfo

ncRNA ID	novel_gma_miR1787
Species	Glycine max
Class	miRNA
Genome position	Chr8:1774185-1774249 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451649;SRR835759;SRR835762;SRR835763;SRR835765;SRR1451605;SRR1451623
Length	21
Mature sequence(if miRNA)	1 - CUCUCCCUCAAGGGCUUCUCG - 21
Stem-loop(if miRNA)	--   UC              C -   UAA AU   CUC  CCUCAAGGGCUUCU G CUU   C  C   |||  |||||||||||||| | |||   |   GAG  GGGGUUCCCGGAGA C GAA   G  C AU   GA              U A   CAA AA
Stem-loop sequence	CUCUCCCUCAAGGGCUUCUCGCUUUAACAUCCAAGAACAAGACUAGAGGCCCUUGGGGAGGAGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006581024.2	ncRNA:21   GCUCUUCGGGAACUCCCUCUC   1   *||||||||*||||||||||| targets:889   AGAGAAGCCAUUGAGGGAGAG   909 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC102664389 (LOC102664389), mRNA	uncharacterized LOC102664389(LOC102664389)	coding protein	psRNATarget
XM_006581024.2	ncRNA:21   GCUCUUCGGGAACUCCCUCUC   1   *||||||||*||||||||||| targets:940   AGAGAAGCCAUUGAGGGAGAG   960 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC102664389 (LOC102664389), mRNA	uncharacterized LOC102664389(LOC102664389)	coding protein	psRNATarget
XM_006581024.2	ncRNA:21   GCUCUUCGGGAACUCCCUCUC   1   *||||||||*||||||||||| targets:991   AGAGAAGCCAUUGAGGGAGAG   1011 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC102664389 (LOC102664389), mRNA	uncharacterized LOC102664389(LOC102664389)	coding protein	psRNATarget
AK243963.1	ncRNA:21   GCUCUUCGGGAACUCCCUCUC   1   **|||||||*||||||||||* targets:406   AAAGAAGCCAUUGAGGGAGAA   426 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-01-L17	NA	coding protein	psRNATarget
U64866.1	ncRNA:21   GCUCUUCGGGAACUCCCUCUC   1   **|||||||*||||||||||* targets:423   AAAGAAGCCAUUGAGGGAGAA   443 Target Full Sequence	2.5	Glycine max aluminum induced sali5-4a mRNA, complete cds	NA	coding protein	psRNATarget
NM_001248636.1	ncRNA:21   GCUCUUCGGGAACUCCCUCUC   1   **|||||||*||||||||||* targets:423   AAAGAAGCCAUUGAGGGAGAA   443 Target Full Sequence	2.5	Glycine max sali5-4a protein (SALI5-4A), mRNA	sali5-4a protein(SALI5-4A)	coding protein	psRNATarget
X69639.1	ncRNA:21   GCUCUUCGGGAACUCCCUCUC   1   **|||||||*||||||||||* targets:389   AAAGAAGCCAUUGAGGGAGAA   409 Target Full Sequence	2.5	G.max ADR6 mRNA	NA	coding protein	psRNATarget
AK286109.1	ncRNA:21   GCUCUUCGGGAACUCCCUCUC   1   **|||||||*||||||||||* targets:402   AAAGAAGCCAUUGAGGGAGAA   422 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-22-B02	NA	coding protein	psRNATarget