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BaseInfo

ncRNA ID novel_gma_miR1784
Species Glycine max
Class miRNA
Genome position Chr8:20172502-20172562 [+]
Reference genome Glycine_max_v2.0
Source SRR1451649
Length 24
Mature sequence(if miRNA) 38 - GAUCAUGUUGAUCCGUAUGACUCA - 61
Stem-loop(if miRNA) --AAA             U          U
     CAUACGGAUCAAC UGAUCCGUAU A
     ||||||||||||| |||||||||| C
     GUAUGCCUAGUUG ACUAGGCAUA U
ACUCA             U          C
Stem-loop sequence AAACAUACGGAUCAACUUGAUCCGUAUUACUCAUACGGAUCAUGUUGAUCCGUAUGACUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547498.3
ncRNA:24   ACUCAGUAUGCCUAGUUGUACUAG   1
  |||**|||||||||||||*|||||
targets:407   UGAAGCAUACGGAUCAACUUGAUC   430

1.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:24   ACUCAGUAUGCCUAGUUGUACUAG   1
  |||**|||||||||||||*|||||
targets:1002   UGAAGCAUACGGAUCAACUUGAUC   1025

1.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_006600975.2
ncRNA:24   ACUCAGUAUGCCUAGUUGUACUAG   1
  **||*|*|||||||||||*|||||
targets:1245   AAAGCCUUACGGAUCAACUUGAUC   1268

2.5 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget