ncRNA ID | novel_gma_miR1771 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:4720188-4720293 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451649 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AGCUAAUAACCGUCUUUGAAUCU - 23 |
Stem-loop(if miRNA) |
AGC                  C   AC    ACACAACA                U    UAAUAACCGUCUUUGAAU UAA  GCUU        UUUAAAGACGGUUAUU G    |||||||||||||||||| |||  ||||        ||||||||||||||||    AUUGUUGGCAGAAAUUUA AUU  UGGA        AAGUUUCUGCCAAUAA U AAU                  U   CU    --------                U |
Stem-loop sequence | AGCUAAUAACCGUCUUUGAAUCUAAACGCUUACACAACAUUUAAAGACGGUUAUUUGUUAAUAACCGUCUUUGAAAGGUUCUUAUAUUUAAAGACGGUUGUUAUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014775607.1 |
|
1.5 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_014775607.1 |
|
1.5 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_014775607.1 |
|
1.5 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget |