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BaseInfo

ncRNA ID novel_gma_miR1771
Species Glycine max
Class miRNA
Genome position Chr6:4720188-4720293 [+]
Reference genome Glycine_max_v2.0
Source SRR1451649
Length 23
Mature sequence(if miRNA) 1 - AGCUAAUAACCGUCUUUGAAUCU - 23
Stem-loop(if miRNA) AGC                  C   AC    ACACAACA                U
   UAAUAACCGUCUUUGAAU UAA  GCUU        UUUAAAGACGGUUAUU G
   |||||||||||||||||| |||  ||||        ||||||||||||||||
   AUUGUUGGCAGAAAUUUA AUU  UGGA        AAGUUUCUGCCAAUAA U
AAU                  U   CU    --------                U
Stem-loop sequence AGCUAAUAACCGUCUUUGAAUCUAAACGCUUACACAACAUUUAAAGACGGUUAUUUGUUAAUAACCGUCUUUGAAAGGUUCUUAUAUUUAAAGACGGUUGUUAUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775607.1
ncRNA:23   UC-UAAGUUUCUGCCAAUAAUCGA   1
  ||-||||||||=||||||||||||
targets:1652   AGCAUUCAAAGGCGGUUAUUAGCU   1675

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:23   UCUAAGUUUCUGCCAAUAAUCGA   1
  |*||||||||||||||||||*||
targets:1488   ACAUUCAAAGACGGUUAUUAACU   1510

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:23   UCUAAGUUUCUGCCAAUAAUCGA   1
  |*||||||||||||||||||*||
targets:1543   ACAUUCAAAGACGGUUAUUAACU   1565

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget