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BaseInfo

ncRNA ID	novel_gma_miR1769
Species	Glycine max
Class	miRNA
Genome position	Chr5:20318432-20318631 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451649;SRR3160566
Length	24
Mature sequence(if miRNA)	1 - UAACGGUCAACGUCCAAUUGUGAC - 24
Stem-loop(if miRNA)	--       U                                         C     U     A      UUG    GUGUCAUGUUCUGAUUAGAUGUCA   CACAAUU GACGUUGACCGUUAACAAGUGAUGUUGACUGCCAUGUGUCA GUUCU AUUGG UGAUGA   UCAC                        A   ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||   ||||                        C   GUGUUAA CUGCAACUGGCAAUUGUUCACUACAAUUGAUGGUGCACAGU CAAGA UAACC GUUACU   UUUG                        U CA       C                                         A     U     A      ---    UUAUUAAGUAAAGUGGAAAGUACC
Stem-loop sequence	CACAAUUUGACGUUGACCGUUAACAAGUGAUGUUGACUGCCAUGUGUCACGUUCUUAUUGGAUGAUGAUUGUCACGUGUCAUGUUCUGAUUAGAUGUCAACUCCAUGAAAGGUGAAAUGAAUUAUUGUUUUCAUUGACCAAUUAGAACAUGACACGUGGUAGUUAACAUCACUUGUUAACGGUCAACGUCCAAUUGUGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006583172.2	ncRNA:24   CAGUGUUAACCUGCAACUGGCAAU   1   |||*|||||||||||||||||||| targets:846   GUCUCAAUUGGACGUUGACCGUUA   869 Target Full Sequence	0.0	PREDICTED: Glycine max leucine-rich repeat receptor-like protein kinase PXC1 (LOC102661536), transcript variant X4, mRNA	leucine-rich repeat receptor-like protein kinase PXC1(LOC102661536)	coding protein	psRNATarget
XM_006583171.2	ncRNA:24   CAGUGUUAACCUGCAACUGGCAAU   1   |||*|||||||||||||||||||| targets:880   GUCUCAAUUGGACGUUGACCGUUA   903 Target Full Sequence	0.0	PREDICTED: Glycine max leucine-rich repeat receptor-like protein kinase PXC1 (LOC102661536), transcript variant X3, mRNA	leucine-rich repeat receptor-like protein kinase PXC1(LOC102661536)	coding protein	psRNATarget
XM_014777745.1	ncRNA:24   CAGUGUUAACCUGCAACUGGCAAU   1   |||*|||||||||||||||||||| targets:885   GUCUCAAUUGGACGUUGACCGUUA   908 Target Full Sequence	0.0	PREDICTED: Glycine max leucine-rich repeat receptor-like protein kinase PXC1 (LOC102661536), transcript variant X1, mRNA	leucine-rich repeat receptor-like protein kinase PXC1(LOC102661536)	coding protein	psRNATarget
XM_006583170.2	ncRNA:24   CAGUGUUAACCUGCAACUGGCAAU   1   |||*|||||||||||||||||||| targets:1580   GUCUCAAUUGGACGUUGACCGUUA   1603 Target Full Sequence	0.0	PREDICTED: Glycine max leucine-rich repeat receptor-like protein kinase PXC1 (LOC102661536), transcript variant X2, mRNA	leucine-rich repeat receptor-like protein kinase PXC1(LOC102661536)	coding protein	psRNATarget
XM_006602607.2	ncRNA:24   CAGUGUUAACCUGCAACUGGCAAU   1   **=|=||||*|||||||||||||| targets:497   ACUAUAAUUAGACGUUGACCGUUA   520 Target Full Sequence	1.0	PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA	transcription factor TGA7-like(LOC100794752)	coding protein	psRNATarget
XM_014769463.1	ncRNA:24   CAGUGUUAACCUGCAACUGGCAAU   1   ***|*|||||*|=||||||||||| targets:2410   AAAAAAAUUGAAUGUUGACCGUUA   2433 Target Full Sequence	2.5	PREDICTED: Glycine max pleiotropic drug resistance protein 3-like (LOC100778072), transcript variant X2, mRNA	pleiotropic drug resistance protein 3-like(LOC100778072)	coding protein	psRNATarget