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BaseInfo

ncRNA ID novel_gma_miR1759
Species Glycine max
Class miRNA
Genome position Chr3:37314038-37314080 [-]
Reference genome Glycine_max_v2.0
Source SRR1451649
Length 19
Mature sequence(if miRNA) 25 - UCCAAGAUCCUUUAUGGUU - 43
Stem-loop(if miRNA) --UC       C      GUU
    CAAGAUC UUUAUG   U
    ||||||| ||||||   A
    GUUCUAG GAAUAC   A
UUAA       A      AAA
Stem-loop sequence UCCAAGAUCCUUUAUGGUUUAAAAACAUAAGAGAUCUUGAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003539141.2
ncRNA:19   UUGGUAUUUCCUAGAACCU   1
  ||||||||||||*|||||*
targets:1117   AACCAUAAAGGAACUUGGU   1135

2.5 PREDICTED: Glycine max AP-2 complex subunit mu-like (LOC100803452), transcript variant X2, mRNA AP-2 complex subunit mu-like(LOC100803452) coding protein psRNATarget
XM_006590545.1
ncRNA:19   UUGGUAUUUCCUAGAACCU   1
  ||||||||||||*|||||*
targets:1169   AACCAUAAAGGAACUUGGU   1187

2.5 PREDICTED: Glycine max AP-2 complex subunit mu-like (LOC100803452), transcript variant X1, mRNA AP-2 complex subunit mu-like(LOC100803452) coding protein psRNATarget
XM_006604404.2
ncRNA:19   UUGGUAUUUCCUAGAACCU   1
  ||*||||||||||||||*|
targets:3363   AAACAUAAAGGAUCUUGAA   3381

2.5 PREDICTED: Glycine max calcium-transporting ATPase 12, plasma membrane-type-like (LOC100790034), mRNA calcium-transporting ATPase 12, plasma membrane-type-like(LOC100790034) coding protein psRNATarget
XM_003533784.3
ncRNA:19   UUGGUAUUUCCUAGAACCU   1
  |||=**|||||||||||||
targets:867   AACUUCAAAGGAUCUUGGA   885

3.0 PREDICTED: Glycine max uncharacterized LOC100778779 (LOC100778779), transcript variant X1, mRNA uncharacterized LOC100778779(LOC100778779) coding protein psRNATarget
XM_003547522.3
ncRNA:19   UUGGUAUUUCCUAGAACCU   1
  |||=**|||||||||||||
targets:948   AACUUCAAAGGAUCUUGGA   966

3.0 PREDICTED: Glycine max uncharacterized LOC100808161 (LOC100808161), mRNA uncharacterized LOC100808161(LOC100808161) coding protein psRNATarget
XM_014762020.1
ncRNA:19   UUGGUAUUUCCUAGAACCU   1
  |||=**|||||||||||||
targets:1725   AACUUCAAAGGAUCUUGGA   1743

3.0 PREDICTED: Glycine max uncharacterized LOC100778779 (LOC100778779), transcript variant X2, mRNA uncharacterized LOC100778779(LOC100778779) coding protein psRNATarget