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BaseInfo

ncRNA ID	novel_gma_miR1758
Species	Glycine max
Class	miRNA
Genome position	Chr2:12129107-12129207 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451649
Length	21
Mature sequence(if miRNA)	1 - UUAUUGCUUCUUGCACUUUCC - 21
Stem-loop(if miRNA)	--      C  C                 CAUUC     UG    A     A   UUAUUG UU UUGCACUUUCCAUUUUG     UGAAA  GGCU AUUGC U   |||||| || |||||||||||||||||     |||||  |||| ||||| U   AAUAAC AA AACGUGAAGGGUAAGAU     ACUUU  UCGG UAAUG U GU      A  A                 --AUU     --    G     U
Stem-loop sequence	UUAUUGCUUCUUGCACUUUCCAUUUUGCAUUCUGAAAUGGGCUAAUUGCAUUUUGUAAUGGGCUUUUCAUUAUAGAAUGGGAAGUGCAAAAAACAAUAAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003553114.3	ncRNA:21   CCUUUCACGUUCUUCGUUAUU   1   *|||||||||||||||||||= targets:150   AGAAAGUGCAAGAAGCAAUAG   170 Target Full Sequence	1.0	PREDICTED: Glycine max probable ATP-dependent DNA helicase RecQ (LOC100797777), mRNA	probable ATP-dependent DNA helicase RecQ(LOC100797777)	coding protein	psRNATarget
XM_014773859.1	ncRNA:21   CCUUUCACGUUCUUCGUUAUU   1   **=||||||||||=||||||| targets:1663   UAGAAGUGCAAGAGGCAAUAA   1683 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like (LOC100805564), mRNA	pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like(LOC100805564)	coding protein	psRNATarget
XM_003554304.3	ncRNA:21   CCUUUCACGUUCUUCGUUAUU   1   **=||||||||||=||||||| targets:2279   UAGAAGUGCAAGAGGCAAUAA   2299 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At5g02830, chloroplastic (LOC100794606), mRNA	pentatricopeptide repeat-containing protein At5g02830, chloroplastic(LOC100794606)	coding protein	psRNATarget
XM_014772978.1	ncRNA:21   CCUUUCACGUUCUUCGUUAUU   1   |||||*|||||||||*||||| targets:1105   GGAAAUUGCAAGAAGGAAUAA   1125 Target Full Sequence	2.5	PREDICTED: Glycine max probable sulfate transporter 3.3 (LOC100819130), transcript variant X2, mRNA	probable sulfate transporter 3.3(LOC100819130)	coding protein	psRNATarget
XM_003556025.3	ncRNA:21   CCUUUCACGUUCUUCGUUAUU   1   |||||*|||||||||*||||| targets:1197   GGAAAUUGCAAGAAGGAAUAA   1217 Target Full Sequence	2.5	PREDICTED: Glycine max probable sulfate transporter 3.3 (LOC100819130), transcript variant X1, mRNA	probable sulfate transporter 3.3(LOC100819130)	coding protein	psRNATarget
XM_003528668.3	ncRNA:21   CCUUUCACGUUCUUCGUUAUU   1   *|||||*|*|||||||||||| targets:690   AGAAAGCGAAAGAAGCAAUAA   710 Target Full Sequence	2.5	PREDICTED: Glycine max subtilisin-like protease SBT5.4 (LOC100808488), mRNA	subtilisin-like protease SBT5.4(LOC100808488)	coding protein	psRNATarget