ncRNA ID | novel_gma_miR1753 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:769221-769392 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451649 |
Length | 20 |
Mature sequence(if miRNA) | 153 - UUUUAAAUUUUGGUCAUGGU - 172 |
Stem-loop(if miRNA) |
--       UUU     -  GG        UCGUCACAUUUCUUUAUAUUG    AA UUACAGACAAAUACAAUCAAUGCAGCCACUAUGGCUGCAU   UUUUAAA   UGGUC AU  UUGCGAUU                     UGGG  A                                        U   |||||||   ||||| ||  ||||||||                     ||||  |                                        G   AAAAUUU   ACCAG UG  GACGUUAA                     AUCU  G                                        U CC       -UU     G  UU        ---------------------    -- ACGUUACGGAUACAAAAACCCGGUGAUGUUCCGAUGUUGG |
Stem-loop sequence | UUUUAAAUUUUGGUCAUGGUUGCGAUUUCGUCACAUUUCUUUAUAUUGUGGGAAAUUACAGACAAAUACAAUCAAUGCAGCCACUAUGGCUGCAUUGUGGUUGUAGCCUUGUAGUGGCCCAAAAACAUAGGCAUUGCAGUCUAAAUUGCAGUUGUGGACCAUUUUUAAAACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003543947.3 |
|
2.5 | PREDICTED: Glycine max triacylglycerol lipase 2-like (LOC100814197), mRNA | triacylglycerol lipase 2-like(LOC100814197) | coding protein | psRNATarget |