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BaseInfo

ncRNA ID	novel_gma_miR1748
Species	Glycine max
Class	miRNA
Genome position	Chr1:3088999-3089106 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451649;SRR2968978;SRR835759
Length	22
Mature sequence(if miRNA)	1 - UGAUUUUAGUUUAUGGGAGAAG - 22
Stem-loop(if miRNA)	--     G                     C  CUCAAA     G       AAA   UCUCC AUAAGCUAAAAUCAACUUAUG AC      UUUUG AGAAGUU   U   ||||| ||||||||||||||||||||| ||      ||||| |||||||   G   AGAGG UAUUUGAUUUUAGUUGAAUAC UG      AAAGC UCUUCGA   A GA     G                     A  -AAUUG     G       GAU
Stem-loop sequence	UCUCCGAUAAGCUAAAAUCAACUUAUGCACCUCAAAUUUUGGAGAAGUUAAAUGAUAGAGCUUCUGCGAAAGUUAAGUACAUAAGUUGAUUUUAGUUUAUGGGAGAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK286967.1	ncRNA:22   GAAGAGGGUAUUUGAUUUUAGU   1   ||||||||*||||||||||||| targets:484   CUUCUCCCUUAAACUAAAAUCA   505 Target Full Sequence	1.0	Glycine max cDNA, clone: GMFL01-41-C10	NA	coding protein	psRNATarget
XM_006598978.2	ncRNA:22   GAAGAGGGUAUUUGAUUUUAGU   1   **|||=|=|||||||||||||| targets:2599   GAUCUUCUAUAAACUAAAAUCA   2620 Target Full Sequence	2.0	PREDICTED: Glycine max probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 (LOC100784640), transcript variant X1, mRNA	probable inactive leucine-rich repeat receptor-like protein kinase At3g03770(LOC100784640)	coding protein	psRNATarget
XM_006598981.2	ncRNA:22   GAAGAGGGUAUUUGAUUUUAGU   1   **|||=|=|||||||||||||| targets:2650   GAUCUUCUAUAAACUAAAAUCA   2671 Target Full Sequence	2.0	PREDICTED: Glycine max probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 (LOC100784640), transcript variant X4, mRNA	probable inactive leucine-rich repeat receptor-like protein kinase At3g03770(LOC100784640)	coding protein	psRNATarget
XM_003547614.3	ncRNA:22   GAAGAGGGUAUUUGAUUUUAGU   1   **|||=|=|||||||||||||| targets:2670   GAUCUUCUAUAAACUAAAAUCA   2691 Target Full Sequence	2.0	PREDICTED: Glycine max probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 (LOC100784640), transcript variant X5, mRNA	probable inactive leucine-rich repeat receptor-like protein kinase At3g03770(LOC100784640)	coding protein	psRNATarget
XM_006598980.2	ncRNA:22   GAAGAGGGUAUUUGAUUUUAGU   1   **|||=|=|||||||||||||| targets:2682   GAUCUUCUAUAAACUAAAAUCA   2703 Target Full Sequence	2.0	PREDICTED: Glycine max probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 (LOC100784640), transcript variant X3, mRNA	probable inactive leucine-rich repeat receptor-like protein kinase At3g03770(LOC100784640)	coding protein	psRNATarget
XM_006604075.2	ncRNA:22   GAAGAGGGUAUUUGAUUUUAGU   1   **|||=|=|||||||||||||| targets:2617   GGUCUUCUAUAAACUAAAAUCA   2638 Target Full Sequence	2.0	PREDICTED: Glycine max probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 (LOC100813412), transcript variant X4, mRNA	probable inactive leucine-rich repeat receptor-like protein kinase At3g03770(LOC100813412)	coding protein	psRNATarget
XM_006598979.2	ncRNA:22   GAAGAGGGUAUUUGAUUUUAGU   1   **|||=|=|||||||||||||| targets:2736   GAUCUUCUAUAAACUAAAAUCA   2757 Target Full Sequence	2.0	PREDICTED: Glycine max probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 (LOC100784640), transcript variant X2, mRNA	probable inactive leucine-rich repeat receptor-like protein kinase At3g03770(LOC100784640)	coding protein	psRNATarget
XM_006604074.2	ncRNA:22   GAAGAGGGUAUUUGAUUUUAGU   1   **|||=|=|||||||||||||| targets:2669   GGUCUUCUAUAAACUAAAAUCA   2690 Target Full Sequence	2.0	PREDICTED: Glycine max probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 (LOC100813412), transcript variant X3, mRNA	probable inactive leucine-rich repeat receptor-like protein kinase At3g03770(LOC100813412)	coding protein	psRNATarget
XM_006604072.2	ncRNA:22   GAAGAGGGUAUUUGAUUUUAGU   1   **|||=|=|||||||||||||| targets:2717   GGUCUUCUAUAAACUAAAAUCA   2738 Target Full Sequence	2.0	PREDICTED: Glycine max probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 (LOC100813412), transcript variant X1, mRNA	probable inactive leucine-rich repeat receptor-like protein kinase At3g03770(LOC100813412)	coding protein	psRNATarget
XM_006604073.2	ncRNA:22   GAAGAGGGUAUUUGAUUUUAGU   1   **|||=|=|||||||||||||| targets:2733   GGUCUUCUAUAAACUAAAAUCA   2754 Target Full Sequence	2.0	PREDICTED: Glycine max probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 (LOC100813412), transcript variant X2, mRNA	probable inactive leucine-rich repeat receptor-like protein kinase At3g03770(LOC100813412)	coding protein	psRNATarget
XM_006574366.2	ncRNA:22   GAAGAGGGUAUUUGAUUUUAGU   1   |||||=||||||=||||||||| targets:1320   CUUCUUCCAUAAGCUAAAAUCA   1341 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100798622 (LOC100798622), transcript variant X1, mRNA	uncharacterized LOC100798622(LOC100798622)	coding protein	psRNATarget
XM_014776866.1	ncRNA:22   GAAGAGGGUAUUUGAUUUUAGU   1   ||*||=||||||||||||||=| targets:334   CUACUUCCAUAAACUAAAAUUA   355 Target Full Sequence	2.5	PREDICTED: Glycine max U-box domain-containing protein 35-like (LOC100818628), transcript variant X2, mRNA	U-box domain-containing protein 35-like(LOC100818628)	coding protein	psRNATarget
XM_014764121.1	ncRNA:22   GAAGAGGGUAUUUGAUUUUAGU   1   *|||||*|||=||||||||||| targets:1120   GUUCUCACAUGAACUAAAAUCA   1141 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100782945 (LOC100782945), mRNA	uncharacterized LOC100782945(LOC100782945)	coding protein	psRNATarget