ncRNA ID | novel_gma_miR1746 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:17887119-17887237 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451649 |
Length | 20 |
Mature sequence(if miRNA) | 100 - UUAAGACGAUUGUUUGUAAU - 119 |
Stem-loop(if miRNA) |
--        A             A              C  U          AUCAUU   UUAAGACG UUGUUUGUAAUAA UGUCUUAGAAAAUA AC UUCUAAGACG      A   |||||||| ||||||||||||| |||||||||||||| || ||||||||||      C   GAUUCUGC AACAAACAUUAUU GCAGAAUCUUUUAU UG AAGAUUCUGC      A AA        C             G              A  U          CAACAG |
Stem-loop sequence | UUAAGACGAUUGUUUGUAAUAAAUGUCUUAGAAAAUACACUUUCUAAGACGAUCAUUACAGACAACCGUCUUAGAAUGUAUAUUUUCUAAGACGGUUAUUACAAACAACCGUCUUAGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014762012.1 |
|
2.0 | PREDICTED: Glycine max FAM206 family protein CG9288-like (LOC100819401), transcript variant X1, mRNA | FAM206 family protein CG9288-like(LOC100819401) | coding protein | psRNATarget |