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BaseInfo

ncRNA ID novel_gma_miR1746
Species Glycine max
Class miRNA
Genome position Chr17:17887119-17887237 [-]
Reference genome Glycine_max_v2.0
Source SRR1451649
Length 20
Mature sequence(if miRNA) 100 - UUAAGACGAUUGUUUGUAAU - 119
Stem-loop(if miRNA) --        A             A              C  U          AUCAUU
  UUAAGACG UUGUUUGUAAUAA UGUCUUAGAAAAUA AC UUCUAAGACG      A
  |||||||| ||||||||||||| |||||||||||||| || ||||||||||      C
  GAUUCUGC AACAAACAUUAUU GCAGAAUCUUUUAU UG AAGAUUCUGC      A
AA        C             G              A  U          CAACAG
Stem-loop sequence UUAAGACGAUUGUUUGUAAUAAAUGUCUUAGAAAAUACACUUUCUAAGACGAUCAUUACAGACAACCGUCUUAGAAUGUAUAUUUUCUAAGACGGUUAUUACAAACAACCGUCUUAGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014762012.1
ncRNA:20   UAAUGUUUGUUAGCAGAAUU   1
  **||*|||||||||||||||
targets:1780   CCUAGAAACAAUCGUCUUAA   1799

2.0 PREDICTED: Glycine max FAM206 family protein CG9288-like (LOC100819401), transcript variant X1, mRNA FAM206 family protein CG9288-like(LOC100819401) coding protein psRNATarget