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BaseInfo

ncRNA ID novel_gma_miR1739
Species Glycine max
Class miRNA
Genome position Chr16:22826444-22826541 [+]
Reference genome Glycine_max_v2.0
Source SRR1451649
Length 24
Mature sequence(if miRNA) 1 - AGAAGGAAGACUUCCGGAAGAACU - 24
Stem-loop(if miRNA) --         AC          -----AC   A      C    A     A
  AGAAGGAAG  UUCCGGAAGA       UCC GAAAAC UUUC GAAGA G
  |||||||||  ||||||||||       ||| |||||| |||| |||||
  UCUUCCUUC  AAGGCCUUCU       AGG CUUUUG AAAG CUUCU U
CU         AU          GACAAAA   C      -    C     G
Stem-loop sequence AGAAGGAAGACUUCCGGAAGAACUCCAGAAAACCUUUCAGAAGAAGUGUCUUCCGAAAGUUUUCCGGAAAAACAGUCUUCCGGAAUACUUCCUUCUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003518511.3
ncRNA:24   UCAAGAAGGCCUUCAGAAGGAAGA   1
  ||**=|||=||=||||||||||||
targets:840   AGCAUUUCUGGGAGUCUUCCUUCU   863

2.5 PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At4g26540 (LOC100775762), mRNA probable LRR receptor-like serine/threonine-protein kinase At4g26540(LOC100775762) coding protein psRNATarget
XM_003545039.3
ncRNA:24   UCAAGAAGGCCUUCAGAAGGAAGA   1
  ||**=|||=||=||||||||||||
targets:884   AGCAUUUCUGGGAGUCUUCCUUCU   907

2.5 PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At4g26540 (LOC100813139), mRNA probable LRR receptor-like serine/threonine-protein kinase At4g26540(LOC100813139) coding protein psRNATarget