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BaseInfo

ncRNA ID novel_gma_miR1738
Species Glycine max
Class miRNA
Genome position Chr20:13771649-13771782 [+]
Reference genome Glycine_max_v2.0
Source SRR1294481;SRR2045375
Length 24
Mature sequence(if miRNA) 1 - UAGGCCAGACCAGACUUUGAAAGG - 24
Stem-loop(if miRNA) --          C       --      - ---       UAACCUACAAU    UUUU       GAGCCU    
  UAGGCCAGAC AGACUUU  GAAAGG C   CUGAGCC           GAAU    GAGGUCU      GGCCU
  |||||||||| |||||||  |||||| |   |||||||           ||||    |||||||      ||||A
  AUCCGGUCUG UCUGAAA  UUUUCC G   GGCUCGG           UUUA    UUUCAGA      CCGGU
UA          A       AU      A UUC       ----------U    ---U       AACUAU    
Stem-loop sequence UAGGCCAGACCAGACUUUGAAAGGCCUGAGCCUAACCUACAAUGAAUUUUUGAGGUCUGAGCCUGGCCUAUGGCCUAUCAAAGACUUUUAUUUUGGCUCGGCUUGACCUUUUUAAAAGUCUAGUCUGGCCUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003526283.3
ncRNA:24   GGAAAGUUUCAGACCAGACCGGAU   1
  *||||=|||||||||||||*||||
targets:339   ACUUUUAAAGUCUGGUCUGUCCUA   362

2.5 PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100792539), mRNA UPF0481 protein At3g47200-like(LOC100792539) coding protein psRNATarget