ncRNA ID | novel_gma_miR1738 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:13771649-13771782 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294481;SRR2045375 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAGGCCAGACCAGACUUUGAAAGG - 24 |
Stem-loop(if miRNA) |
--          C       --      - ---       UAACCUACAAU    UUUU       GAGCCU       UAGGCCAGAC AGACUUU  GAAAGG C   CUGAGCC           GAAU    GAGGUCU      GGCCU   |||||||||| |||||||  |||||| |   |||||||           ||||    |||||||      ||||A   AUCCGGUCUG UCUGAAA  UUUUCC G   GGCUCGG           UUUA    UUUCAGA      CCGGU UA          A       AU      A UUC       ----------U    ---U       AACUAU     |
Stem-loop sequence | UAGGCCAGACCAGACUUUGAAAGGCCUGAGCCUAACCUACAAUGAAUUUUUGAGGUCUGAGCCUGGCCUAUGGCCUAUCAAAGACUUUUAUUUUGGCUCGGCUUGACCUUUUUAAAAGUCUAGUCUGGCCUAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003526283.3 |
|
2.5 | PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100792539), mRNA | UPF0481 protein At3g47200-like(LOC100792539) | coding protein | psRNATarget |