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BaseInfo

ncRNA ID	novel_gma_miR1726
Species	Glycine max
Class	miRNA
Genome position	Chr19:38217657-38217751 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1294481;SRR2045376;SRR1292927
Length	21
Mature sequence(if miRNA)	75 - CCUCCACAAGCUCCACCACCU - 95
Stem-loop(if miRNA)	--                       U  G  GA      -    -  AG   GUGGUGGAGCUUGUGGAGGGUGG CC CA  GAGGAA GCAG AU  A   ||||||||||||||||||||||| || ||  |||||| |||| ||   CACCACCUCGAACACCUCCCACC GG GU  CUCCUU CGUU UG  U UC                       U  G  -G      A    A  AA
Stem-loop sequence	GUGGUGGAGCUUGUGGAGGGUGGUCCGCAGAGAGGAAGCAGAUAGAUAAGUAUUGCAUUCCUCGUGGGGUCCACCCUCCACAAGCUCCACCACCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JN896307.1	ncRNA:21   UCCACCACCUCGAACACCUCC   1   |||||||||||*||||||||| targets:846   AGGUGGUGGAGAUUGUGGAGG   866 Target Full Sequence	1.5	Glycine max heat shock transcription factor HSFB2a mRNA, complete cds	NA	coding protein	psRNATarget
NM_001317454.1	ncRNA:21   UCCACCACCUCGAACACCUCC   1   |||||||||||*||||||||| targets:846   AGGUGGUGGAGAUUGUGGAGG   866 Target Full Sequence	1.5	Glycine max heat stress transcription factor B-2a-like (LOC100817440), mRNA	heat stress transcription factor B-2a-like(LOC100817440)	coding protein	psRNATarget
XM_003517558.3	ncRNA:21   UCCACCACCUCGAACACCUCC   1   **||||||||||||*|||||| targets:2918   UAGUGGUGGAGCUUAUGGAGG   2938 Target Full Sequence	1.5	PREDICTED: Glycine max presequence protease 2, chloroplastic/mitochondrial (LOC100778773), mRNA	presequence protease 2, chloroplastic/mitochondrial(LOC100778773)	coding protein	psRNATarget
XM_014761724.1	ncRNA:21   UCCACCACCUCGAACACCUCC   1   |||*|||||||||*||||||| targets:708   AGGAGGUGGAGCUGGUGGAGG   728 Target Full Sequence	2.5	PREDICTED: Glycine max glycine-rich cell wall structural protein 1.8-like (LOC102670230), mRNA	glycine-rich cell wall structural protein 1.8-like(LOC102670230)	coding protein	psRNATarget
XM_006601870.2	ncRNA:21   UCCACCACCUCGAACACCUCC   1   *|*||||||||||||||||*| targets:1750   UGAUGGUGGAGCUUGUGGAUG   1770 Target Full Sequence	2.5	PREDICTED: Glycine max small subunit processome component 20 homolog (LOC100811612), mRNA	small subunit processome component 20 homolog(LOC100811612)	coding protein	psRNATarget
XM_006573869.1	ncRNA:21   UCCACCACCUCGAACACCUCC   1   *||*|||||||||*||||||| targets:297   UGGAGGUGGAGCUGGUGGAGG   317 Target Full Sequence	2.5	PREDICTED: Glycine max glycine-rich cell wall structural protein 1.8-like (LOC102667405), mRNA	glycine-rich cell wall structural protein 1.8-like(LOC102667405)	coding protein	psRNATarget
XM_003524473.3	ncRNA:21   UCCACCACCUCGAACACCUCC   1   ||||**||||||||||||||* targets:3000   AGGUCAUGGAGCUUGUGGAGC   3020 Target Full Sequence	3.0	PREDICTED: Glycine max ABC transporter G family member 32-like (LOC100815410), transcript variant X1, mRNA	ABC transporter G family member 32-like(LOC100815410)	coding protein	psRNATarget
XM_003549743.3	ncRNA:21   UCCACCACCUCGAACACCUCC   1   ||||**||||||||||||||* targets:3030   AGGUAAUGGAGCUUGUGGAGC   3050 Target Full Sequence	3.0	PREDICTED: Glycine max ABC transporter G family member 32-like (LOC100785375), transcript variant X1, mRNA	ABC transporter G family member 32-like(LOC100785375)	coding protein	psRNATarget