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BaseInfo

ncRNA ID novel_gma_miR1719
Species Glycine max
Class miRNA
Genome position Chr7:11865905-11866045 [+]
Reference genome Glycine_max_v2.0
Source SRR1451648
Length 24
Mature sequence(if miRNA) 1 - UAUUUUAAAAUCGAUGUUGUAAGU - 24
Stem-loop(if miRNA) --     U              -   UG    A        A                A     -----    A
  UAUUU AAAAUCGAUGUUGU AAG  CUUA CAACAUCG UUUUCAAAUAACCGAU UUGAA     ACUA A
  ||||| |||||||||||||| |||  |||| |||||||| |||||||||||||||| |||||     ||||
  AUAAA UUUUGGCUACAGCA UUC  GAAU GUUGUAGC AAAAGUUUAUUGGCUA AAUUU     UGAU U
CA     C              A   GU    -        C                C     UAGUG    U
Stem-loop sequence UAUUUUAAAAUCGAUGUUGUAAGUGCUUAACAACAUCGAUUUUCAAAUAACCGAUAUUGAAACUAAAUUUAGUGUGAUUUUAACAUCGGUUAUUUGAAAACCGAUGUUGUAAGUGCUUAACGACAUCGGUUUUCAAAUAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776578.1
ncRNA:24   UGAAUGUUGUAGCUAAAAUUUUAU   1
  |=||||||=|||||||||||||||
targets:1718   AUUUACAAUAUCGAUUUUAAAAUA   1741

1.0 PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA ankyrin repeat and SOCS box protein 7-like(LOC100786031) coding protein psRNATarget