Search result

BaseInfo

ncRNA ID	novel_gma_miR1717
Species	Glycine max
Class	miRNA
Genome position	Chr7:15408232-15408319 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451648;DRR031984
Length	21
Mature sequence(if miRNA)	1 - AAAUUAGCUAAUGGAGAGCUC - 21
Stem-loop(if miRNA)	--   A               U    A     G    ---A   C   GCU UCCAUUAGCUAAUUU UAGA GUUUU UCAU    UAG U   ||| ||||||||||||||| |||| ||||| ||||    ||| U   CGA AGGUAAUCGAUUAAA AUCU CAGGA AGUA    AUC C CU   G               C    A     G    GAAA   U
Stem-loop sequence	GCUAUCCAUUAGCUAAUUUUUAGAAGUUUUGUCAUAUAGCUUCUCUAAAAGAUGAGAGGACAUCUACAAAUUAGCUAAUGGAGAGCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003525187.3	ncRNA:21   CUCGAGAGGUAAUCGAUUAAA   1   |||=|||=||||||||||||| targets:1848   GAGUUCUUCAUUAGCUAAUUU   1868 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100801179 (LOC100801179), mRNA	uncharacterized LOC100801179(LOC100801179)	coding protein	psRNATarget
XM_006594197.2	ncRNA:21   CUCGAGAGGUAAUCGAUUAAA   1   *||=|=||||||||||||||| targets:795   AAGUUUUCCAUUAGCUAAUUU   815 Target Full Sequence	2.0	PREDICTED: Glycine max probable anion transporter 6, chloroplastic (LOC100806856), transcript variant X2, mRNA	probable anion transporter 6, chloroplastic(LOC100806856)	coding protein	psRNATarget
XM_003541440.3	ncRNA:21   CUCGAGAGGUAAUCGAUUAAA   1   *||=|=||||||||||||||| targets:795   AAGUUUUCCAUUAGCUAAUUU   815 Target Full Sequence	2.0	PREDICTED: Glycine max probable anion transporter 6, chloroplastic (LOC100806856), transcript variant X1, mRNA	probable anion transporter 6, chloroplastic(LOC100806856)	coding protein	psRNATarget