Search result

BaseInfo

ncRNA ID novel_gma_miR1708
Species Glycine max
Class miRNA
Genome position Chr6:211177-211249 [-]
Reference genome Glycine_max_v2.0
Source SRR1451648
Length 24
Mature sequence(if miRNA) 1 - CUCAUACGGAUCAACAUGAUAUGU - 24
Stem-loop(if miRNA) --UAC   A                C     AAUUA
     UCA GUUGAUUCGUAUGAGU AUACG     A
     ||| |||||||||||||||| |||||     G
     AGU CAACUAGGCAUACUCA UAUGC     C
UGUAU   A                A     CUACU
Stem-loop sequence UACUCAAGUUGAUUCGUAUGAGUCAUACGAAUUAAGCUCAUCCGUAUAACUCAUACGGAUCAACAUGAUAUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776734.1
ncRNA:24   UGUAUAGUACAACUAGGCAUACUC   1
  ||**||||||||||||=|||||||
targets:1203   ACUGAUCAUGUUGAUCUGUAUGAG   1226

1.5 PREDICTED: Glycine max G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 (LOC100807748), mRNA G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290(LOC100807748) coding protein psRNATarget
XM_003518744.3
ncRNA:24   UGUAUAGUACAACUAGGCAUACUC   1
  |||*-||||||||*||||||||||
targets:737   ACAC-UCAUGUUGCUCCGUAUGAG   759

1.5 PREDICTED: Glycine max uncharacterized LOC100814457 (LOC100814457), mRNA uncharacterized LOC100814457(LOC100814457) coding protein psRNATarget