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BaseInfo

ncRNA ID novel_gma_miR1700
Species Glycine max
Class miRNA
Genome position Chr6:20324573-20324623 [+]
Reference genome Glycine_max_v2.0
Source SRR1451648
Length 22
Mature sequence(if miRNA) 1 - CUUGAGAACCGUCUUAGAAUGU - 22
Stem-loop(if miRNA) --        -           UGUG
  CUUGAGAA CCGUCUUAGAA    U
  |||||||| |||||||||||
  GAACUUUU GGCAGAAUCUU    A
AA        U           UUUA
Stem-loop sequence CUUGAGAACCGUCUUAGAAUGUGUAAUUUUUCUAAGACGGUUUUUCAAGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003534913.2
ncRNA:22   UGUAAGAUUCUGCCAAGAGUUC   1
  ||*|||*|||||||||=|||||
targets:5   ACUUUCAAAGACGGUUUUCAAG   26

2.5 PREDICTED: Glycine max uncharacterized LOC100781107 (LOC100781107), mRNA uncharacterized LOC100781107(LOC100781107) coding protein psRNATarget
BT098277.1
ncRNA:22   UGUAAGAUUCUGCCA-AGAGUUC   1
  *|*||||||||||||-|||||||
targets:220   CCUUUCUAAGACGGUGUCUCAAG   242

3.0 Soybean clone JCVI-FLGm-23E5 unknown mRNA NA coding protein psRNATarget
BT094921.1
ncRNA:22   UGUAAGAUUCUGCCA-AGAGUUC   1
  *|*||||||||||||-|||||||
targets:234   CCUUUCUAAGACGGUGUCUCAAG   256

3.0 Soybean clone JCVI-FLGm-19G5 unknown mRNA NA coding protein psRNATarget