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BaseInfo

ncRNA ID novel_gma_miR1697
Species Glycine max
Class miRNA
Genome position Chr5:8397465-8397644 [-]
Reference genome Glycine_max_v2.0
Source SRR1451648
Length 24
Mature sequence(if miRNA) 1 - UUCAAAAAACCGAUGUUAACUGUC - 24
Stem-loop(if miRNA) --                         AA           C                              -  A        UUUCAACA
  UAGUUAACAUCGGUUUUUUGAAAAA  AUCGAUAUUAA UAACGUUAACAUCGAUUUUUUGUAAAAAAA UC AUGUUAAC        U
  |||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||| || ||||||||        U
  GUCAAUUGUAGCCAAAAAACUUUUU  UAGCUAUAAUU AUUGCAAUUGUAGCUAAAAGACAUUUUUUU AG UACAAUUG        A
CU                         --           A                              U  C        CUUACACA
Stem-loop sequence UAGUUAACAUCGGUUUUUUGAAAAAAAAUCGAUAUUAACUAACGUUAACAUCGAUUUUUUGUAAAAAAAUCAAUGUUAACUUUCAACAUUAACACAUUCGUUAACAUCGAUUUUUUUUACAGAAAAUCGAUGUUAACGUUAAUUAAUAUCGAUUUUUUCAAAAAACCGAUGUUAACUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB171004.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAACUU   1
  ||||*||||||||||||||||*||
targets:15   GACAUUUAACAUCGGUUUUUUAAA   38

1.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
JB171004.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAACUU   1
  ||||*||||||||||||||||*||
targets:56   GACAUUUAACAUCGGUUUUUUAAA   79

1.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
JB171004.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAACUU   1
  ||||*||||||||||||||||*||
targets:157   GACAUUUAACAUCGGUUUUUUAAA   180

1.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
JB171004.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAACUU   1
  *|||*||||||||||||||||*||
targets:116   AACAUUUAACAUCGGUUUUUUAAA   139

1.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
LQ242673.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAACUU   1
  ||||*||||||||||||||||*||
targets:15   GACAUUUAACAUCGGUUUUUUAAA   38

1.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
LQ242673.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAACUU   1
  ||||*||||||||||||||||*||
targets:56   GACAUUUAACAUCGGUUUUUUAAA   79

1.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
LQ242673.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAACUU   1
  ||||*||||||||||||||||*||
targets:157   GACAUUUAACAUCGGUUUUUUAAA   180

1.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
LQ242673.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAACUU   1
  *|||*||||||||||||||||*||
targets:116   AACAUUUAACAUCGGUUUUUUAAA   139

1.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
HI410543.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAACUU   1
  ||||*||||||||||||||||*||
targets:15   GACAUUUAACAUCGGUUUUUUAAA   38

1.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
HI410543.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAACUU   1
  ||||*||||||||||||||||*||
targets:56   GACAUUUAACAUCGGUUUUUUAAA   79

1.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
HI410543.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAACUU   1
  ||||*||||||||||||||||*||
targets:157   GACAUUUAACAUCGGUUUUUUAAA   180

1.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
HI410543.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAACUU   1
  *|||*||||||||||||||||*||
targets:116   AACAUUUAACAUCGGUUUUUUAAA   139

1.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget