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BaseInfo

ncRNA ID	novel_gma_miR1690
Species	Glycine max
Class	miRNA
Genome position	Chr4:23837545-23837760 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451648;SRR1295518
Length	24
Mature sequence(if miRNA)	193 - GACCGAUGUAGAAUGCUCAGCAUU - 216
Stem-loop(if miRNA)	--               CUC G                   CC   C     C    U    AAUUU   U     AU    A     G AG     A             GACCGAUGUAGAAUG   A CAUUCUAAGACGGUCAUGU  CAA GACCG CUUA AAUG     CAU CUACA  GGUC UUUAU A  GACCG UGUAGAAUGCA   |||||||||||||||   | |||||||||||||||||||  ||| ||||| |||| ||||     ||| |||||  |||| ||||| |  ||||| ||||||||||U   CUGGCUACAUCUUAC   U GUAAGAUUCUGCCAGUGCA  GUU CUGGC GAAU UUAC     GUA GAUGU  CCAG AAGUA U  CUGGU GCAUCUUACGU UU               CAU G                   CA   U     A    C    GUUAC   -     AC    G     G CA     A
Stem-loop sequence	GACCGAUGUAGAAUGCUCAGCAUUCUAAGACGGUCAUGUCCCAACGACCGCCUUAUAAUGAAUUUCAUUCUACAAUGGUCAUUUAUGAAGGACCGAUGUAGAAUGCAUUGCAUUCUACGAUGGUCACUGAUGAAGGACCCAUGUAGAUGCAUUGCAUUCUAAGACGGUCUUUGACACGUGACCGUCUUAGAAUGGUUACCAUUCUACAUCGGUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006598094.2	ncRNA:24   UUACGACUCGUAAGAUGUAGCCAG   1   |||||**||||||||||||||||| targets:928   AAUGCAUAGCAUUCUACAUCGGUC   951 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X20, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768221.1	ncRNA:24   UUACGACUCGUAAGAUGUAGCCAG   1   |||||**||||||||||||||||| targets:1041   AAUGCAUAGCAUUCUACAUCGGUC   1064 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X21, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768217.1	ncRNA:24   UUACGACUCGUAAGAUGUAGCCAG   1   |||||**||||||||||||||||| targets:1201   AAUGCAUAGCAUUCUACAUCGGUC   1224 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X9, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768216.1	ncRNA:24   UUACGACUCGUAAGAUGUAGCCAG   1   |||||**||||||||||||||||| targets:1478   AAUGCAUAGCAUUCUACAUCGGUC   1501 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X8, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768212.1	ncRNA:24   UUACGACUCGUAAGAUGUAGCCAG   1   |||||**||||||||||||||||| targets:1641   AAUGCAUAGCAUUCUACAUCGGUC   1664 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X1, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget