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BaseInfo

ncRNA ID	novel_gma_miR1688
Species	Glycine max
Class	miRNA
Genome position	Chr4:40809092-40809210 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451648;SRR1451650;SRR1292924;SRR1451662;SRR1294484;SRR1451664;SRR1294485;SRR1295517;SRR1295524;SRR1295525;SRR1295530;SRR1294476
Length	24
Mature sequence(if miRNA)	96 - AACCACCACCAUGAUCGUCAAUCG - 119
Stem-loop(if miRNA)	--                      C  CA      CC           ---      G  G   AACCACCACCAUGAUCGUCAAU GU  CCACCA  AACAUGAUUGU   UGUCAU GC A   |||||||||||||||||||||| ||  ||||||  |||||||||||   |||||| ||   UUGGUGGUGGUACUAGUAGUUG CG  GGUGGU  UUGUACUAACA   ACAGUA UG C CG                      A  AC      AA           ACA      A  A
Stem-loop sequence	AACCACCACCAUGAUCGUCAAUCGUCACCACCACCAACAUGAUUGUUGUCAUGGCGACAGUAAUGACAACAACAAUCAUGUUAAUGGUGGCAGCAGUUGAUGAUCAUGGUGGUGGUUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006603495.1	ncRNA:24   GCUA------ACUGCUAGUACCACCACCAA   1   =|=|------|||||||*|||||||||||| targets:122   UGGUGGAGUGUGACGAUGAUGGUGGUGGUU   151 Target Full Sequence	1.5	PREDICTED: Glycine max eggshell protein-like (LOC102661414), mRNA	eggshell protein-like(LOC102661414)	coding protein	psRNATarget
XM_006605080.1	ncRNA:24   GCUA-----ACUGCUAGUACCACCACCAA   1   ||||-----|||||||*|||||||||||* targets:135   CGAUGACAGUGACGAUAAUGGUGGUGGUG   163 Target Full Sequence	2.5	PREDICTED: Glycine max keratin, type II cytoskeletal 1-like (LOC102663044), mRNA	keratin, type II cytoskeletal 1-like(LOC102663044)	coding protein	psRNATarget
XM_006598318.1	ncRNA:24   GCUAACUGCUAGUACCACCACCAA   1   **=||||=|||*|||||||||||| targets:49   GUGUUGAUGAUGAUGGUGGUGGUU   72 Target Full Sequence	2.5	PREDICTED: Glycine max glycine-rich cell wall structural protein 1.0-like (LOC102666261), mRNA	glycine-rich cell wall structural protein 1.0-like(LOC102666261)	coding protein	psRNATarget
XM_006603496.1	ncRNA:24   GCUA-----ACUGCUAGUACCACCACCAA   1   =|||-----||||||**|||||||||||| targets:99   UGAUGGCUAUGACGAAGAUGGUGGUGGUU   127 Target Full Sequence	2.5	PREDICTED: Glycine max eggshell protein 1-like (LOC102661540), mRNA	eggshell protein 1-like(LOC102661540)	coding protein	psRNATarget
XM_014774123.1	ncRNA:24   GCUAACUGCUAGUACCACCACCAA   1   |||*-||||||*|||||||||||* targets:378   CGAG-GACGAUGAUGGUGGUGGUG   400 Target Full Sequence	2.5	PREDICTED: Glycine max loricrin-like (LOC106798160), mRNA	loricrin-like(LOC106798160)	coding protein	psRNATarget
XM_003529857.3	ncRNA:24   GCUAACUGCUAGUACCACCACCAA   1   =***||==|||||||||||||||* targets:700   UCUGUGGUGAUCAUGGUGGUGGUG   723 Target Full Sequence	3.0	PREDICTED: Glycine max tyrosine decarboxylase 1-like (LOC100802993), mRNA	tyrosine decarboxylase 1-like(LOC100802993)	coding protein	psRNATarget
XM_014761724.1	ncRNA:24   GCUA-----ACUGCUAGUACCACCACCAA   1   ||||-----||=*||*||||||||||||| targets:597   CGAUGCAGGUGGAGAACAUGGUGGUGGUU   625 Target Full Sequence	3.0	PREDICTED: Glycine max glycine-rich cell wall structural protein 1.8-like (LOC102670230), mRNA	glycine-rich cell wall structural protein 1.8-like(LOC102670230)	coding protein	psRNATarget