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BaseInfo

ncRNA ID	novel_gma_miR1687
Species	Glycine max
Class	miRNA
Genome position	Chr4:29167609-29167696 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451648
Length	21
Mature sequence(if miRNA)	68 - UAUUUCUACAUCGGUGAUUAC - 88
Stem-loop(if miRNA)	--AAGG                   C             G  GA       ACCGAUGUAGAAAUAUGUA UUUCUAAGACGGU UU  G       ||||||||||||||||||| ||||||||||||| ||       UGGCUACAUCUUUAUACGU AAAGAUUCUGCCA GA  G CAUUAG                   U             A  AU
Stem-loop sequence	AAGGACCGAUGUAGAAAUAUGUACUUUCUAAGACGGUGUUGAGGUAAGAACCGUCUUAGAAAUUGCAUAUUUCUACAUCGGUGAUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006585358.2	ncRNA:21   CAUUAGUGGCUACAUCUUUAU   1   |||=*|||||||||||||||| targets:1414   GUAGGCACCGAUGUAGAAAUA   1434 Target Full Sequence	2.0	PREDICTED: Glycine max high affinity sulfate transporter 2-like (LOC100815818), transcript variant X4, mRNA	high affinity sulfate transporter 2-like(LOC100815818)	coding protein	psRNATarget
XM_006585356.2	ncRNA:21   CAUUAGUGGCUACAUCUUUAU   1   |||=*|||||||||||||||| targets:1480   GUAGGCACCGAUGUAGAAAUA   1500 Target Full Sequence	2.0	PREDICTED: Glycine max high affinity sulfate transporter 2-like (LOC100815818), transcript variant X2, mRNA	high affinity sulfate transporter 2-like(LOC100815818)	coding protein	psRNATarget
XM_006585357.2	ncRNA:21   CAUUAGUGGCUACAUCUUUAU   1   |||=*|||||||||||||||| targets:1627   GUAGGCACCGAUGUAGAAAUA   1647 Target Full Sequence	2.0	PREDICTED: Glycine max high affinity sulfate transporter 2-like (LOC100815818), transcript variant X3, mRNA	high affinity sulfate transporter 2-like(LOC100815818)	coding protein	psRNATarget
XM_006585355.2	ncRNA:21   CAUUAGUGGCUACAUCUUUAU   1   |||=*|||||||||||||||| targets:1678   GUAGGCACCGAUGUAGAAAUA   1698 Target Full Sequence	2.0	PREDICTED: Glycine max high affinity sulfate transporter 2-like (LOC100815818), transcript variant X1, mRNA	high affinity sulfate transporter 2-like(LOC100815818)	coding protein	psRNATarget
XM_014767461.1	ncRNA:21   CAUUAGUGGCUACAUCUUUAU   1   *||||*||||||||||||*|| targets:2269   CUAAUAACCGAUGUAGAAUUA   2289 Target Full Sequence	2.5	PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA	putative dual specificity protein phosphatase DSP8(LOC100787468)	coding protein	psRNATarget
XM_014774861.1	ncRNA:21   CAUUAGUGGCUACAUCUUUAU   1   |||=*|||||||||||||||= targets:1310   GUAGGCACCGAUGUAGAAAUG   1330 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC106798441 (LOC106798441), transcript variant X3, mRNA	uncharacterized LOC106798441(LOC106798441)	coding protein	psRNATarget
XM_014774861.1	ncRNA:21   CAUUAGUGGCUACAUCUUUAU   1   ||||*||*||||||||||||* targets:1136   GUAAGCAACGAUGUAGAAAUC   1156 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC106798441 (LOC106798441), transcript variant X3, mRNA	uncharacterized LOC106798441(LOC106798441)	coding protein	psRNATarget