ncRNA ID | bra-miR167d |
Species | Brassica rapa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UGAAGCUGCCAGCAUGAUCUA - NA |
Stem-loop(if miRNA) |
    CAC   -  U U A         C               --U   ---     C       GGCG   CGG CA C G UGAAGCUGC AGCAUGAUCUAAUUA   CUU   UCUUU UCUGUUG ||||   ||| || | | ||||||||| |||||||||||||||   |||   ||||| ||||||A CCGC   GUC GU G C ACUUUGACG UUGUACUAGAUUAGU   GAG   AGAAA AGGUAGC     UCU   A  U C C         C               UGU   UAC     -       |
Stem-loop sequence | GGCGCACCGGCAUCUGAUGAAGCUGCCAGCAUGAUCUAAUUAUCUUUCUUUCUCUGUUGACGAUGGAAAAGACAUGAGUGUUGAUUAGAUCAUGUUCGCAGUUUCACCCGUUGACUGUCUCGCC |
1 | PMID:18558089
"Characterization of conserved and novel microRNAs and their targets, including a TuMV-induced TIR-NBS-LRR class R gene-derived novel miRNA in Brassica"; He XF, Fang YY, Feng L, Guo HS; FEBS Lett. 582:2445-2452(2008). |