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BaseInfo

ncRNA ID bra-miR167d
Species Brassica rapa
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGAAGCUGCCAGCAUGAUCUA - NA
Stem-loop(if miRNA)     CAC   -  U U A         C               --U   ---     C      
GGCG   CGG CA C G UGAAGCUGC AGCAUGAUCUAAUUA   CUU   UCUUU UCUGUUG
||||   ||| || | | ||||||||| |||||||||||||||   |||   ||||| ||||||A
CCGC   GUC GU G C ACUUUGACG UUGUACUAGAUUAGU   GAG   AGAAA AGGUAGC
    UCU   A  U C C         C               UGU   UAC     -      
Stem-loop sequence GGCGCACCGGCAUCUGAUGAAGCUGCCAGCAUGAUCUAAUUAUCUUUCUUUCUCUGUUGACGAUGGAAAAGACAUGAGUGUUGAUUAGAUCAUGUUCGCAGUUUCACCCGUUGACUGUCUCGCC

Reference

1 PMID:18558089
"Characterization of conserved and novel microRNAs and their targets, including a TuMV-induced TIR-NBS-LRR class R gene-derived novel miRNA in Brassica";
He XF, Fang YY, Feng L, Guo HS;
FEBS Lett. 582:2445-2452(2008).