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BaseInfo

ncRNA ID novel_gma_miR1684
Species Glycine max
Class miRNA
Genome position Chr3:26191364-26191448 [-]
Reference genome Glycine_max_v2.0
Source SRR1451648
Length 24
Mature sequence(if miRNA) 62 - UUUCAGAGAACCGUCUUAGAAUGU - 85
Stem-loop(if miRNA) --UUUCA         C       -G  UUUUCUUAA   AAA
       GAGAACCGU UUAGAAU  UC         AAC   A
       ||||||||| |||||||  ||         |||
       CUUUUGGUA AAUCUUA  AG         UUG   A
AAAAACA         U       AA  UUUAAAAAA   AAA
Stem-loop sequence UUUCAGAGAACCGUCUUAGAAUGUCUUUUCUUAAAACAAAAAAAAGUUAAAAAAUUUGAAAAUUCUAAUAUGGUUUUCACAAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:24   UGUAAGAUUCUGCCAAGAGACUUU   1
  ||||||||||||||||||||||||
targets:2609   ACAUUCUAAGACGGUUCUCUGAAA   2632

0.0 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014771087.1
ncRNA:24   UGUAAGAUUCUGCCAAGAGACUUU   1
  ||||||||||||||||||=|||||
targets:2513   ACAUUCUAAGACGGUUCUUUGAAA   2536

1.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014763138.1
ncRNA:24   UGUAAGAUUCUGCCAAGAGACUUU   1
  |||||||||||=||||||||||||
targets:1527   ACAUUCUAAGAUGGUUCUCUGAAA   1550

1.5 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget
XM_006589010.2
ncRNA:24   UGUAAGAUUCUGCCAAGAGACUUU   1
  |||||||||||=||||||||||||
targets:2236   ACAUUCUAAGAUGGUUCUCUGAAA   2259

1.5 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget