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BaseInfo

ncRNA ID bra-miR167c
Species Brassica rapa
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGAAGCUGCCAGCAUGAUCUA - NA
Stem-loop(if miRNA)      -    G  UCU A         C             UA  U   UU     GUUGA      G
GGUGU ACAG CA   G UGAAGCUGC AGCAUGAUCUAAU  AC UUC  UCUCU     UUUUAU A
||||| |||| ||   | ||||||||| |||||||||||||  || |||  |||||     ||||||
CCACG UGUC GU   C ACUUUGACG UUGUACUAGAUUA  UG GAG  AGAGA     AAGGUA C
     C    A  UAC C         C             GC  U   -U     ----A      A
Stem-loop sequence GGUGUACAGGCAUCUGAUGAAGCUGCCAGCAUGAUCUAAUUAACUUUCUUUCUCUGUUGAUUUUAUGACAAUGGAAAAGAGAUGAGUGUCGAUUAGAUCAUGUUCGCAGUUUCACCCAUUGACUGUCGCACC

Reference

1 PMID:18558089
"Characterization of conserved and novel microRNAs and their targets, including a TuMV-induced TIR-NBS-LRR class R gene-derived novel miRNA in Brassica";
He XF, Fang YY, Feng L, Guo HS;
FEBS Lett. 582:2445-2452(2008).