ncRNA ID | bra-miR167c |
Species | Brassica rapa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UGAAGCUGCCAGCAUGAUCUA - NA |
Stem-loop(if miRNA) |
     -    G  UCU A         C             UA  U   UU     GUUGA      G GGUGU ACAG CA   G UGAAGCUGC AGCAUGAUCUAAU  AC UUC  UCUCU     UUUUAU A ||||| |||| ||   | ||||||||| |||||||||||||  || |||  |||||     |||||| CCACG UGUC GU   C ACUUUGACG UUGUACUAGAUUA  UG GAG  AGAGA     AAGGUA C      C    A  UAC C         C             GC  U   -U     ----A      A |
Stem-loop sequence | GGUGUACAGGCAUCUGAUGAAGCUGCCAGCAUGAUCUAAUUAACUUUCUUUCUCUGUUGAUUUUAUGACAAUGGAAAAGAGAUGAGUGUCGAUUAGAUCAUGUUCGCAGUUUCACCCAUUGACUGUCGCACC |
1 | PMID:18558089
"Characterization of conserved and novel microRNAs and their targets, including a TuMV-induced TIR-NBS-LRR class R gene-derived novel miRNA in Brassica"; He XF, Fang YY, Feng L, Guo HS; FEBS Lett. 582:2445-2452(2008). |