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BaseInfo

ncRNA ID novel_gma_miR1671
Species Glycine max
Class miRNA
Genome position Chr2:13689257-13689394 [+]
Reference genome Glycine_max_v2.0
Source SRR1451648
Length 21
Mature sequence(if miRNA) 118 - UUAACAUCGGUUAUGUAUAGA - 138
Stem-loop(if miRNA) CAUAGAA    -    G          AUGUUAACAUCGGUGAUCUAUAGAUAACCGAUGUUAACAUUUGU
       AACC GAUG UAAUGUACAA                                            A
       |||| |||| ||||||||||                                            C
       AUAU UAUU GGCUACAAUU                                            A
-----AG    G    -          ACAUGUAUUCAAUUGUAGCCGAUAGAUAUGUAUUGGCUACAAUU
Stem-loop sequence CAUAGAAAACCGAUGGUAAUGUACAAAUGUUAACAUCGGUGAUCUAUAGAUAACCGAUGUUAACAUUUGUACAUUAACAUCGGUUAUGUAUAGAUAGCCGAUGUUAACUUAUGUACAUUAACAUCGGUUAUGUAUAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003535242.3
ncRNA:21   AGAUAUGUAUUGGCUACAAUU   1
  |*||||=||||||*|||||||
targets:1995   UAUAUAUAUAACCAAUGUUAA   2015

2.5 PREDICTED: Glycine max pectinesterase-like (LOC100820142), mRNA pectinesterase-like(LOC100820142) coding protein psRNATarget