ncRNA ID | novel_gma_miR1671 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:13689257-13689394 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451648 |
Length | 21 |
Mature sequence(if miRNA) | 118 - UUAACAUCGGUUAUGUAUAGA - 138 |
Stem-loop(if miRNA) |
CAUAGAA    -    G          AUGUUAACAUCGGUGAUCUAUAGAUAACCGAUGUUAACAUUUGU        AACC GAUG UAAUGUACAA                                            A        |||| |||| ||||||||||                                            C        AUAU UAUU GGCUACAAUU                                            A -----AG    G    -          ACAUGUAUUCAAUUGUAGCCGAUAGAUAUGUAUUGGCUACAAUU |
Stem-loop sequence | CAUAGAAAACCGAUGGUAAUGUACAAAUGUUAACAUCGGUGAUCUAUAGAUAACCGAUGUUAACAUUUGUACAUUAACAUCGGUUAUGUAUAGAUAGCCGAUGUUAACUUAUGUACAUUAACAUCGGUUAUGUAUAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003535242.3 |
|
2.5 | PREDICTED: Glycine max pectinesterase-like (LOC100820142), mRNA | pectinesterase-like(LOC100820142) | coding protein | psRNATarget |