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BaseInfo

ncRNA ID novel_gma_miR1665
Species Glycine max
Class miRNA
Genome position Chr20:29671481-29671564 [-]
Reference genome Glycine_max_v2.0
Source SRR1451648
Length 24
Mature sequence(if miRNA) 61 - UUUAGAGAACCGUCUUAGAAUGUC - 84
Stem-loop(if miRNA) -         -C           G -------------       AAA
 UUUAGAGAA  CGUCUUAGAAU U             CUUUUUU   A
 |||||||||  ||||||||||| |             |||||||   A
 GAAUCUUUU  GCAGAAUCUUA G             GAAAAAA   A
A         UA           G ACUUUAAAAAAUU       AAC
Stem-loop sequence UUUAGAGAACCGUCUUAGAAUGUCUUUUUUAAAAAACAAAAAAAAGUUAAAAAAUUUCAGGAUUCUAAGACGAUUUUUCUAAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:24   CUGUAAGAUUCUGCCAAGAGAUUU   1
  *||||||||||||||||||||=||
targets:2608   UACAUUCUAAGACGGUUCUCUGAA   2631

1.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget