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BaseInfo

ncRNA ID	novel_gma_miR1658
Species	Glycine max
Class	miRNA
Genome position	Chr10:10272244-10272321 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451648;SRR1451621
Length	21
Mature sequence(if miRNA)	58 - CCAUUAGCUAAUUCGUAGAAG - 78
Stem-loop(if miRNA)	--             C     A CU       AUAA   CU   CCAUUAGCUAAUU GUAGA G  CUCUCAU    CUU  C   ||||||||||||| ||||| |  |||||||    |||   GGUAAUCGAUUAA CAUCU C  GAGAGUA    GAA  U UA             A     A AG       ----   AA
Stem-loop sequence	CCAUUAGCUAAUUCGUAGAAGCUCUCUCAUAUAACUUCUCUAAAAGAUGAGAGGACAUCUACAAAUUAGCUAAUGGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014763080.1	ncRNA:21   GAAGAUGCUUAAUCGAUUACC   1   |||||||*||||||||||||| targets:3634   CUUCUACAAAUUAGCUAAUGG   3654 Target Full Sequence	1.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X6, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763076.1	ncRNA:21   GAAGAUGCUUAAUCGAUUACC   1   |||||||*||||||||||||| targets:3739   CUUCUACAAAUUAGCUAAUGG   3759 Target Full Sequence	1.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X2, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763077.1	ncRNA:21   GAAGAUGCUUAAUCGAUUACC   1   |||||||*||||||||||||| targets:3870   CUUCUACAAAUUAGCUAAUGG   3890 Target Full Sequence	1.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X3, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763079.1	ncRNA:21   GAAGAUGCUUAAUCGAUUACC   1   |||||||*||||||||||||| targets:3882   CUUCUACAAAUUAGCUAAUGG   3902 Target Full Sequence	1.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X5, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763075.1	ncRNA:21   GAAGAUGCUUAAUCGAUUACC   1   |||||||*||||||||||||| targets:3971   CUUCUACAAAUUAGCUAAUGG   3991 Target Full Sequence	1.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_006603606.2	ncRNA:21   GAAGAUGCUUAAUCGAUUACC   1   =||||||*||||||||||||| targets:1531   UUUCUACAAAUUAGCUAAUGG   1551 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X1, mRNA	uncharacterized LOC100500460(LOC100500460)	coding protein	psRNATarget
XM_006603608.2	ncRNA:21   GAAGAUGCUUAAUCGAUUACC   1   =||||||*||||||||||||| targets:1541   UUUCUACAAAUUAGCUAAUGG   1561 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X3, mRNA	uncharacterized LOC100500460(LOC100500460)	coding protein	psRNATarget
XM_003525187.3	ncRNA:21   GAAGAUGCUUAAUCGAUUACC   1   |*|||||*||||||||||||* targets:1910   CAUCUACAAAUUAGCUAAUGA   1930 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100801179 (LOC100801179), mRNA	uncharacterized LOC100801179(LOC100801179)	coding protein	psRNATarget