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BaseInfo

ncRNA ID novel_gma_miR1657
Species Glycine max
Class miRNA
Genome position Chr19:30752618-30752758 [-]
Reference genome Glycine_max_v2.0
Source SRR1451648
Length 24
Mature sequence(if miRNA) 118 - UAUUUUAAAAUCGAUGUUGUAAGU - 141
Stem-loop(if miRNA) --       A   C        -   UG    ACCAC    A                        CACAC
  UAUUUUA AAU GAUGUUGU AAG  CUUA     AUCG UUUUCAAAUAACUGAUGUUAAAAU     U
  ||||||| ||| |||||||| |||  ||||     |||| ||||||||||||||||||||||||     A
  AUAAAGU UUG CUACAGCA UUU  GAAU     UAGC AAAAGUUUAUUGGCUACAAUUUUG     A
CA       A   A        A   GU    -GUUA    C                        AUUUA
Stem-loop sequence UAUUUUAAAAUCGAUGUUGUAAGUGCUUAACCACAUCGAUUUUCAAAUAACUGAUGUUAAAAUCACACUAAAUUUAGUUUUAACAUCGGUUAUUUGAAAACCGAUAUUGUAAGUGUUUAACGACAUCAGUUAUGAAAUAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776578.1
ncRNA:24   UGAAUGUUGUAGCUAAAAUUUUAU   1
  |=||||||=|||||||||||||||
targets:1718   AUUUACAAUAUCGAUUUUAAAAUA   1741

1.0 PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA ankyrin repeat and SOCS box protein 7-like(LOC100786031) coding protein psRNATarget