ncRNA ID | novel_gma_miR1657 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:30752618-30752758 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451648 |
Length | 24 |
Mature sequence(if miRNA) | 118 - UAUUUUAAAAUCGAUGUUGUAAGU - 141 |
Stem-loop(if miRNA) |
--       A   C        -   UG    ACCAC    A                        CACAC   UAUUUUA AAU GAUGUUGU AAG  CUUA     AUCG UUUUCAAAUAACUGAUGUUAAAAU     U   ||||||| ||| |||||||| |||  ||||     |||| ||||||||||||||||||||||||     A   AUAAAGU UUG CUACAGCA UUU  GAAU     UAGC AAAAGUUUAUUGGCUACAAUUUUG     A CA       A   A        A   GU    -GUUA    C                        AUUUA |
Stem-loop sequence | UAUUUUAAAAUCGAUGUUGUAAGUGCUUAACCACAUCGAUUUUCAAAUAACUGAUGUUAAAAUCACACUAAAUUUAGUUUUAACAUCGGUUAUUUGAAAACCGAUAUUGUAAGUGUUUAACGACAUCAGUUAUGAAAUAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014776578.1 |
|
1.0 | PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA | ankyrin repeat and SOCS box protein 7-like(LOC100786031) | coding protein | psRNATarget |