ncRNA ID | ahy-miR3514-3p |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | NA - UCACCGUUAAUACAGAAUCCUU - NA |
Stem-loop(if miRNA) |
-------------ACAAUA                      G         -    CGU        -   UC    C       A         AAGUUUUU                    GAAGGAUUCUGUAUUAACGGUG ACAUGAUUU AUCU   UUUUAAAG AUA  UUUG AUUUCAU UGAGAUUUA        A                    |||||||||||||||||||||| ||||||||| ||||   |||||||| |||  |||| ||||||| |||||||||                    CUUCCUAAGACAUAAUUGCCAC UGUACUGAA UAGA   GAAAUUUU UAU  AAAU UAAAGUA ACUCUAAAU        U GGGGACUGAUUUAUAUUAA                      -         A    AUU        A   UU    U       C         AUAAUGGU |
Stem-loop sequence | ACAAUAGAAGGAUUCUGUAUUAACGGUGGACAUGAUUUAUCUCGUUUUUAAAGAUAUCUUUGCAUUUCAUAUGAGAUUUAAAGUUUUUAUUGGUAAUAUAAAUCUCACAUGAAAUUUAAAUUUAUAUUUUAAAGUUAAGAUAAAGUCAUGUCACCGUUAAUACAGAAUCCUUCAAUUAUAUUUAGUCAGGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JR551935.1 |
|
1.0 | TSA: Arachis hypogaea Ahy.Unigene11590 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01020161.1 |
|
2.5 | TSA: Arachis hypogaea Unigene20170 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR542096.1 |
|
2.5 | TSA: Arachis hypogaea Ahy.Unigene1430 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01020160.1 |
|
2.5 | TSA: Arachis hypogaea Unigene20169 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR553562.1 |
|
2.5 | TSA: Arachis hypogaea Ahy.Unigene13300 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01020164.1 |
|
2.5 | TSA: Arachis hypogaea Unigene20173 mRNA sequence | NA | coding protein | psRNATarget |
1 | PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)"; Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ; BMC Plant Biol. 10:3(2010). |