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BaseInfo

ncRNA ID ahy-miR3514-3p
Species Arachis hypogaea
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 22
Mature sequence(if miRNA) NA - UCACCGUUAAUACAGAAUCCUU - NA
Stem-loop(if miRNA) -------------ACAAUA                      G         -    CGU        -   UC    C       A         AAGUUUUU
                   GAAGGAUUCUGUAUUAACGGUG ACAUGAUUU AUCU   UUUUAAAG AUA  UUUG AUUUCAU UGAGAUUUA        A
                   |||||||||||||||||||||| ||||||||| ||||   |||||||| |||  |||| ||||||| |||||||||
                   CUUCCUAAGACAUAAUUGCCAC UGUACUGAA UAGA   GAAAUUUU UAU  AAAU UAAAGUA ACUCUAAAU        U
GGGGACUGAUUUAUAUUAA                      -         A    AUU        A   UU    U       C         AUAAUGGU
Stem-loop sequence ACAAUAGAAGGAUUCUGUAUUAACGGUGGACAUGAUUUAUCUCGUUUUUAAAGAUAUCUUUGCAUUUCAUAUGAGAUUUAAAGUUUUUAUUGGUAAUAUAAAUCUCACAUGAAAUUUAAAUUUAUAUUUUAAAGUUAAGAUAAAGUCAUGUCACCGUUAAUACAGAAUCCUUCAAUUAUAUUUAGUCAGGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR551935.1
ncRNA:22   UUCCUAAGACAUAAUUGCCACU   1
  |||||||=||||||||||||||
targets:311   AAGGAUUUUGUAUUAACGGUGA   332

1.0 TSA: Arachis hypogaea Ahy.Unigene11590 mRNA sequence NA coding protein psRNATarget
GAER01020161.1
ncRNA:22   UUCCUAAGACAUAAUUGCCACU   1
  **|*|||||||||*||||||||
targets:259   UUGUAUUCUGUAUAAACGGUGA   280

2.5 TSA: Arachis hypogaea Unigene20170 mRNA sequence NA coding protein psRNATarget
JR542096.1
ncRNA:22   UUCCUAAGACAUAAUUGCCACU   1
  **|*|||||||||*||||||||
targets:396   UUGUAUUCUGUAUAAACGGUGA   417

2.5 TSA: Arachis hypogaea Ahy.Unigene1430 mRNA sequence NA coding protein psRNATarget
GAER01020160.1
ncRNA:22   UUCCUAAGACAUAAUUGCCACU   1
  **|*|||||||||*||||||||
targets:509   UUGUAUUCUGUAUAAACGGUGA   530

2.5 TSA: Arachis hypogaea Unigene20169 mRNA sequence NA coding protein psRNATarget
JR553562.1
ncRNA:22   UUCCUAAGACAUAAUUGCCACU   1
  **|*|||||||||*||||||||
targets:1171   UUGUAUUCUGUAUAAACGGUGA   1192

2.5 TSA: Arachis hypogaea Ahy.Unigene13300 mRNA sequence NA coding protein psRNATarget
GAER01020164.1
ncRNA:22   UUCCUAAGACAUAAUUGCCACU   1
  **|*|||||||||*||||||||
targets:3170   UUGUAUUCUGUAUAAACGGUGA   3191

2.5 TSA: Arachis hypogaea Unigene20173 mRNA sequence NA coding protein psRNATarget

Reference

1 PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)";
Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ;
BMC Plant Biol. 10:3(2010).