ncRNA ID | novel_gma_miR1652 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:41434084-41434165 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451648;SRR1451649 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCCAUUUGGAUUUUGACGUCU - 21 |
Stem-loop(if miRNA) |
--      U  -          C C        ACAA  A  A   UCCAUU GG AUUUUGACGU U AGCCUUGA    UG CG A   |||||| || |||||||||| | ||||||||    || || U   AGGUAA CC UAGAACUGUA A UCGGAAUU    AC GU C UG      -  A          U A        ---C  C  C |
Stem-loop sequence | UCCAUUUGGAUUUUGACGUCUCAGCCUUGAACAAUGACGAAUCCUGCCACUUAAGGCUAAUAUGUCAAGAUACCAAUGGAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003537454.3 |
|
2.0 | PREDICTED: Glycine max laccase-14-like (LOC100814128), mRNA | laccase-14-like(LOC100814128) | coding protein | psRNATarget | |||||||||
XM_003536907.3 |
|
3.0 | PREDICTED: Glycine max transcription factor PIF1-like (LOC100792121), transcript variant X1, mRNA | transcription factor PIF1-like(LOC100792121) | coding protein | psRNATarget | |||||||||
XM_006588653.2 |
|
3.0 | PREDICTED: Glycine max transcription factor PIF1-like (LOC100792121), transcript variant X2, mRNA | transcription factor PIF1-like(LOC100792121) | coding protein | psRNATarget |