ncRNA ID | novel_gma_miR1642 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:44820182-44820355 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451648 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AUCGGUUUUCUGUAAAAAAAUC - 22 |
Stem-loop(if miRNA) |
--         CUG                   GAAUG              -----         A                 A      CG   AUCGGUUUU   UAAAAAAAUCGAUGUUGAC     UGUUAAUAUUGACA     GUUAACAUC GUUUUUUUAAAAAAUCG UGUUAA  U   |||||||||   |||||||||||||||||||     ||||||||||||||     ||||||||| ||||||||||||||||| ||||||   UAGCCAAAA   AUUUUUUUAGCUACAAUUG     ACAGUUAUAAUUGU     CAAUUGUAG CAAAAAGGUUUUUUGGC ACAAUU  A UG         --A                   -----              GUAAG         C                 A      AU |
Stem-loop sequence | AUCGGUUUUCUGUAAAAAAAUCGAUGUUGACGAAUGUGUUAAUAUUGACAGUUAACAUCAGUUUUUUUAAAAAAUCGAUGUUAACGUAUAUUAACAACGGUUUUUUGGAAAAACCGAUGUUAACGAAUGUGUUAAUAUUGACAGUUAACAUCGAUUUUUUUAAAAAACCGAUGU |