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BaseInfo

ncRNA ID novel_gma_miR1642
Species Glycine max
Class miRNA
Genome position Chr18:44820182-44820355 [+]
Reference genome Glycine_max_v2.0
Source SRR1451648
Length 22
Mature sequence(if miRNA) 1 - AUCGGUUUUCUGUAAAAAAAUC - 22
Stem-loop(if miRNA) --         CUG                   GAAUG              -----         A                 A      CG
  AUCGGUUUU   UAAAAAAAUCGAUGUUGAC     UGUUAAUAUUGACA     GUUAACAUC GUUUUUUUAAAAAAUCG UGUUAA  U
  |||||||||   |||||||||||||||||||     ||||||||||||||     ||||||||| ||||||||||||||||| ||||||
  UAGCCAAAA   AUUUUUUUAGCUACAAUUG     ACAGUUAUAAUUGU     CAAUUGUAG CAAAAAGGUUUUUUGGC ACAAUU  A
UG         --A                   -----              GUAAG         C                 A      AU
Stem-loop sequence AUCGGUUUUCUGUAAAAAAAUCGAUGUUGACGAAUGUGUUAAUAUUGACAGUUAACAUCAGUUUUUUUAAAAAAUCGAUGUUAACGUAUAUUAACAACGGUUUUUUGGAAAAACCGAUGUUAACGAAUGUGUUAAUAUUGACAGUUAACAUCGAUUUUUUUAAAAAACCGAUGU